Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC055876.1-202ENST00000567053 138 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 MIR548S-201ENST00000581352 82 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AL160281.1-201ENST00000605307 311 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 RMST_3.1-201ENST00000611651 109 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AL020991.1-201ENST00000612314 373 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AL354950.2-201ENST00000617939 290 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AC024614.3-201ENST00000637860 256 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AL137003.2-201ENST00000606924 2538 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC000403.1-201ENST00000613696 3585 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 RNU6-61P-201ENST00000365528 109 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 MIR887-201ENST00000401258 79 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AL139397.2-201ENST00000404529 772 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC096664.2-201ENST00000411843 406 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC022028.1-201ENST00000412054 408 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 ZNF90P2-204ENST00000419323 1075 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 SNRPEP10-201ENST00000420249 274 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 RAC1P6-201ENST00000423911 575 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC006512.1-201ENST00000468816 291 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC104472.2-201ENST00000469035 601 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AL163973.1-201ENST00000484753 577 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC092436.1-201ENST00000506450 503 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC117522.1-201ENST00000509821 380 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC105417.1-201ENST00000514691 285 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 RNA5SP401-201ENST00000515920 127 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 RN7SKP282-201ENST00000516824 299 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 RN7SKP219-201ENST00000516825 296 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 SNORA31.26-201ENST00000517250 137 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AL138976.2-201ENST00000563989 694 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AL451007.1-201ENST00000595491 289 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC010133.1-201ENST00000615809 842 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC022306.2-201ENST00000617563 647 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC007318.2-201ENST00000620999 243 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC024940.5-201ENST00000622889 474 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 MIR4275-201ENST00000636486 87 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 AC092435.3-201ENST00000565538 3654 ntBASIC3.22□□□□□ -1.89
SNX9Q9Y5X1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SNX9Q9Y5X1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SNX9Q9Y5X1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.21□□□□□ -1.89
SNX9Q9Y5X1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 Y_RNA.255-201ENST00000364581 97 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 RNU6-996P-201ENST00000365438 107 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 RNU6-701P-201ENST00000384059 107 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 SNORA44-201ENST00000384584 132 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 MIR493-201ENST00000385254 89 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 RNU6-1068P-201ENST00000410958 103 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 RNA5SP344-201ENST00000411081 104 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 AC244505.4-201ENST00000434905 287 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 SSXP5-201ENST00000443473 287 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 AC020550.1-201ENST00000447385 163 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 AL118520.1-201ENST00000450770 291 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 HSPE1P6-201ENST00000479457 291 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 MTCYBP18-201ENST00000501056 747 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 SNORA31.3-201ENST00000516029 96 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 HIF1AP1-201ENST00000553642 175 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 AP002826.1-201ENST00000608835 315 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 AC011155.2-201ENST00000623202 216 ntBASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX9Q9Y5X1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms