Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL591034.2-201ENST00000402839 359 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.64□□□□□ -2.31
AP4S1Q9Y587 ZNF863P-201ENST00000426746 417 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 THAP5P1-201ENST00000439089 262 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.64□□□□□ -2.31
AP4S1Q9Y587 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.64□□□□□ -2.31
AP4S1Q9Y587 AC112492.4-201ENST00000456549 352 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 SUMO1P1-201ENST00000497904 306 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.64□□□□□ -2.31
AP4S1Q9Y587 ACA64.5-201ENST00000516207 127 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 SNORA48.11-201ENST00000517015 89 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.64□□□□□ -2.31
AP4S1Q9Y587 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.64□□□□□ -2.31
AP4S1Q9Y587 COPS8P3-201ENST00000526024 482 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.64□□□□□ -2.31
AP4S1Q9Y587 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.64□□□□□ -2.31
AP4S1Q9Y587 MIR3973-201ENST00000579824 107 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 SNRPGP17-201ENST00000603780 214 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 uc_338.14-201ENST00000613162 166 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 AL353997.5-201ENST00000618886 171 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 AC012676.2-201ENST00000619258 186 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 AC091895.1-201ENST00000624494 256 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 RNU1-22P-201ENST00000363334 158 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
AP4S1Q9Y587 RNU6-140P-201ENST00000384566 108 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.63□□□□□ -2.31
AP4S1Q9Y587 VTA1P1-201ENST00000414044 866 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 CYCSP33-201ENST00000414485 327 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC013410.2-201ENST00000422627 201 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.63□□□□□ -2.31
AP4S1Q9Y587 C1DP1-201ENST00000426049 402 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC108667.1-201ENST00000428618 249 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AL512637.2-201ENST00000431287 1256 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC098831.1-201ENST00000440661 216 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC068135.1-201ENST00000446164 246 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC006512.1-201ENST00000468816 291 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC108210.2-201ENST00000503681 201 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.63□□□□□ -2.31
AP4S1Q9Y587 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.63□□□□□ -2.31
AP4S1Q9Y587 SNORA31.16-201ENST00000516773 139 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC009268.1-201ENST00000561352 1203 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC002400.1-201ENST00000569310 726 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC136932.1-201ENST00000574771 208 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.63□□□□□ -2.31
AP4S1Q9Y587 AL078604.3-201ENST00000615580 211 ntBASIC0.63□□□□□ -2.31
AP4S1Q9Y587 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
AP4S1Q9Y587 OR5T3-201ENST00000303059 1023 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 MIR302D-201ENST00000362275 68 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 RNU2-47P-201ENST00000410649 186 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 RNA5SP100-201ENST00000410903 110 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 RNA5SP59-201ENST00000410922 110 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 TPMTP3-201ENST00000411928 735 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.62□□□□□ -2.31
AP4S1Q9Y587 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.62□□□□□ -2.31
AP4S1Q9Y587 SNRPFP4-201ENST00000456366 242 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
AP4S1Q9Y587 RPS3AP22-201ENST00000488297 769 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 AC018437.1-201ENST00000492214 406 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.62□□□□□ -2.31
AP4S1Q9Y587 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.62□□□□□ -2.31
AP4S1Q9Y587 RAB11AP2-201ENST00000545905 639 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.62□□□□□ -2.31
AP4S1Q9Y587 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.62□□□□□ -2.31
AP4S1Q9Y587 MIR4653-201ENST00000585107 83 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 VN1R107P-201ENST00000601784 209 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 AC011374.2-201ENST00000607135 526 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 AL355472.4-201ENST00000610233 626 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.62□□□□□ -2.31
AP4S1Q9Y587 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.62□□□□□ -2.31
AP4S1Q9Y587 AC110491.1-201ENST00000562191 2010 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 HSBP1P2-201ENST00000299671 229 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 RNU1-124P-201ENST00000363861 145 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 MIR506-201ENST00000384998 124 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 AL139098.1-201ENST00000407291 389 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.61□□□□□ -2.31
AP4S1Q9Y587 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.61□□□□□ -2.31
AP4S1Q9Y587 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.61□□□□□ -2.31
AP4S1Q9Y587 MTCO1P53-201ENST00000441633 699 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 snoU13.23-201ENST00000458863 104 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 RN7SL429P-201ENST00000479090 223 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 AP001025.1-201ENST00000486139 332 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 RN7SL489P-201ENST00000486185 223 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 RN7SL327P-201ENST00000488659 223 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 AC093767.1-201ENST00000504523 156 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 RNU6-322P-201ENST00000516010 103 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.61□□□□□ -2.31
AP4S1Q9Y587 AC211469.2-201ENST00000605461 205 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.61□□□□□ -2.31
AP4S1Q9Y587 RN7SL853P-201ENST00000617250 223 ntBASIC0.61□□□□□ -2.31
AP4S1Q9Y587 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.61□□□□□ -2.31
AP4S1Q9Y587 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
AP4S1Q9Y587 RNU1-23P-201ENST00000363361 144 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 RNU1-36P-201ENST00000365130 165 ntBASIC0.6□□□□□ -2.31
AP4S1Q9Y587 RNU6-53P-201ENST00000365367 106 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms