Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LAP3P1-201ENST00000403648 294 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 RPS6P12-201ENST00000432491 726 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 RPS23P5-201ENST00000495419 428 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AL121603.1-201ENST00000553815 142 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AC006349.1-201ENST00000555526 235 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AC053481.4-201ENST00000583164 216 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AL161798.1-201ENST00000604630 131 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AL353748.2-201ENST00000622148 471 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AC039056.2-201ENST00000622261 511 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AL022311.1-201ENST00000623726 19416 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 NOL8P1-201ENST00000508336 3529 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 RNA5SP240-201ENST00000365355 128 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 MIR200C-201ENST00000384980 68 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AL079342.1-201ENST00000401460 267 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 RNA5SP239-201ENST00000410218 129 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AL117339.3-201ENST00000418733 162 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AC079780.1-201ENST00000428259 207 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AL133547.1-201ENST00000448546 220 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AC079354.2-201ENST00000453523 154 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 RN7SKP272-201ENST00000516988 232 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AC093249.4-201ENST00000564755 259 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AC023824.2-201ENST00000566185 400 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 MIR4643-201ENST00000577473 78 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AC113403.1-201ENST00000604910 193 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 AC009812.4-201ENST00000569134 1805 ntBASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ZC3H4Q9UPT8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 Y_RNA.123-201ENST00000363338 102 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-937P-201ENST00000384325 106 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 RNY3P4-201ENST00000384428 101 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 MIR10A-201ENST00000385043 110 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 BX679664.1-201ENST00000434429 253 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 RNU7-120P-201ENST00000459334 63 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 RNA5SP103-201ENST00000459503 118 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 RNU7-175P-201ENST00000515915 61 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 AC084851.1-201ENST00000529105 249 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 TRAV8-5-201ENST00000537369 341 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 CBX3P4-201ENST00000538909 354 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 AP002770.2-201ENST00000543613 532 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 AC005255.1-201ENST00000593748 216 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 RPL23AP78-201ENST00000599928 470 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 SRGNP1-201ENST00000603392 451 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 uc_338.13-201ENST00000618243 179 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 MUC2-202ENST00000613187 4845 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 AC090740.1-201ENST00000623193 2262 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 AC083843.3-201ENST00000623679 2186 ntBASIC5.52□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-428P-201ENST00000362942 107 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 SNORD14B-201ENST00000364533 90 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 SNORA9-201ENST00000384215 133 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AC007738.1-201ENST00000413892 348 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms