Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 Y_RNA.116-201ENST00000363292 103 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 RNU6-514P-201ENST00000384208 107 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 RNU6-933P-201ENST00000384424 107 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 Y_RNA.525-201ENST00000384570 113 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 MIR195-201ENST00000385194 87 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 SNORA26.2-201ENST00000390922 122 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 SNORD78.2-201ENST00000391076 69 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 RNU4-30P-201ENST00000410245 143 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 RPS12P23-201ENST00000419579 400 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 AL138785.1-201ENST00000425821 331 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 RPS26P47-201ENST00000427219 348 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 RPS27AP1-201ENST00000475545 471 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 RPL36AP41-201ENST00000493820 306 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 AC108471.1-201ENST00000513977 287 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 DEFB131C-201ENST00000528817 165 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 OR1M4P-201ENST00000589199 287 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 ZNF826P-207ENST00000622273 1910 ntBASIC5.86□□□□□ -1.47
PDZRN3Q9UPQ7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 AC008079.2-201ENST00000623543 20396 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 Y_RNA.75-201ENST00000362927 97 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 RNA5SP28-201ENST00000363841 119 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 Y_RNA.420-201ENST00000384043 110 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 RPS12P10-201ENST00000427031 377 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 RPS29P17-201ENST00000430795 166 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 IFNA11P-201ENST00000446352 526 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 AL353691.1-201ENST00000451332 387 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 RPL37P6-201ENST00000460682 294 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 FCF1P8-201ENST00000510322 597 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 HMGB3P3-201ENST00000510526 400 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 RNA5SP76-201ENST00000516277 87 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 RPL21P9-201ENST00000556149 474 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 AC004825.2-201ENST00000616634 455 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 ASNSP1-201ENST00000518311 1939 ntBASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.85□□□□□ -1.47
PDZRN3Q9UPQ7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 RNU4-56P-201ENST00000364700 142 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 MIR23A-201ENST00000385245 73 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 RPS26P8-201ENST00000393490 348 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 MIR513C-201ENST00000401352 84 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 RNY4P30-201ENST00000410216 95 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AL358453.1-201ENST00000422522 250 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AC024067.1-201ENST00000426199 223 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AC005002.2-201ENST00000438228 269 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AC008264.1-201ENST00000447612 367 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AL359073.1-201ENST00000448036 403 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 RNU7-107P-201ENST00000459121 61 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AC133134.1-201ENST00000466800 359 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AP002826.1-201ENST00000608835 315 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AC009318.2-201ENST00000610917 651 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AC114781.5-201ENST00000615297 108 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 ZYXP1-201ENST00000617638 118 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AL445567.2-201ENST00000618935 498 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AC015726.2-201ENST00000620112 122 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 AL023881.1-201ENST00000621088 301 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 CR392039.4-201ENST00000624968 501 ntBASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms