Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 FARSBP1-201ENST00000435808 1778 ntBASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 RNU6-512P-201ENST00000364438 103 ntBASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 ST13P20-201ENST00000447996 1065 ntBASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 RPL12P25-201ENST00000455592 494 ntBASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 NACAP3-201ENST00000552100 481 ntBASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 AC012414.6-201ENST00000568241 401 ntBASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 AC010620.1-201ENST00000601088 1102 ntBASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM4Q9ULL8 AL021368.2-201ENST00000606125 5352 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AC008669.1-201ENST00000565823 2178 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 RNU6-884P-201ENST00000363889 107 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 RNA5SP99-201ENST00000364020 114 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AL139397.2-201ENST00000404529 772 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 RNU2-68P-201ENST00000410878 191 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AL365496.1-201ENST00000426885 215 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AC011816.1-201ENST00000441346 546 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AC093899.1-201ENST00000457984 376 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 MRPS17P3-201ENST00000465453 385 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 RPS15AP34-201ENST00000487776 387 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AC107222.1-201ENST00000510899 637 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AC091304.9-201ENST00000612091 226 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AL158063.1-201ENST00000615349 536 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 Z69908.1-201ENST00000622603 247 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 AC068880.5-201ENST00000624331 290 ntBASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SHROOM4Q9ULL8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 U8.3-201ENST00000363321 132 ntBASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 RNU4-1-201ENST00000363925 141 ntBASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 MTND2P4-201ENST00000445034 1004 ntBASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 AC010265.1-201ENST00000513509 211 ntBASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 RNA5SP471-201ENST00000516971 106 ntBASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 HMGB1P41-201ENST00000520234 440 ntBASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 AP002453.2-201ENST00000533503 320 ntBASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 OR11H5P-201ENST00000554039 926 ntBASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 AL161734.1-201ENST00000609720 557 ntBASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 AC025594.3-201ENST00000613068 790 ntBASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM4Q9ULL8 RNU5E-1-201ENST00000362477 120 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 RNU1-100P-201ENST00000365255 165 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 ISCA1P1-201ENST00000426679 387 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 TRIAP1P1-201ENST00000427062 225 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 GAPDHP17-201ENST00000449858 1001 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 Vault.3-201ENST00000516676 95 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 RNA5SP165-201ENST00000517142 115 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 SEPT7P9-203ENST00000604116 343 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AC007363.1-201ENST00000604736 620 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 MTND4LP5-201ENST00000605152 292 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AP002360.4-201ENST00000606980 481 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AC099778.2-201ENST00000610904 211 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 SNORA20.2-201ENST00000383922 131 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 RNU6-817P-201ENST00000391083 104 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 RPS12P24-201ENST00000412619 387 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AC010153.1-201ENST00000432862 727 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 RPL26P9-201ENST00000457466 433 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 RPS29P12-201ENST00000460178 152 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 RPL36AP51-201ENST00000487216 318 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 RN7SL636P-201ENST00000497504 294 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AC114786.4-201ENST00000508771 728 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AC107294.3-201ENST00000609211 526 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AC110079.1-202ENST00000635213 138 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 AC110994.2-201ENST00000635481 492 ntBASIC4.75□□□□□ -1.65
SHROOM4Q9ULL8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 SMIM11P1-201ENST00000369586 178 ntBASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 RPS3AP36-201ENST00000398190 775 ntBASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 AC007283.2-201ENST00000424739 197 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms