Protein–RNA interactions for Protein: Q9UKK3

PARP4, Poly [ADP-ribose] polymerase 4, humanhuman

Known RBP Predictions only

Length 1,724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP4Q9UKK3 FRG1HP-204ENST00000617940 757 ntBASIC0.68□□□□□ -2.3
PARP4Q9UKK3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.68□□□□□ -2.3
PARP4Q9UKK3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
PARP4Q9UKK3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 RNU6-1197P-201ENST00000391183 107 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 RNU6-1328P-201ENST00000410938 106 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.67□□□□□ -2.3
PARP4Q9UKK3 CST2P1-201ENST00000425770 87 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.67□□□□□ -2.3
PARP4Q9UKK3 RPL23AP35-201ENST00000451906 501 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 RNU6-420P-201ENST00000458780 107 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 RNU6-173P-201ENST00000364215 104 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 MIR493-201ENST00000385254 89 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 RNU2-70P-201ENST00000410718 179 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 RPL37P10-201ENST00000412884 288 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 MTCYBP3-201ENST00000445588 1137 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 HMGB1P35-201ENST00000503360 598 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 UBL5P1-201ENST00000507979 193 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 MTCYBP16-201ENST00000509187 1129 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 RNA5SP165-201ENST00000517142 115 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 SCARNA11.3-201ENST00000517276 130 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.67□□□□□ -2.3
PARP4Q9UKK3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.67□□□□□ -2.3
PARP4Q9UKK3 AC087045.1-201ENST00000605856 382 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 AC024595.1-201ENST00000623088 387 ntBASIC0.67□□□□□ -2.3
PARP4Q9UKK3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
PARP4Q9UKK3 MIR515-2-201ENST00000384883 83 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 MIR515-1-201ENST00000384884 83 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 MTCYBP29-201ENST00000436327 1006 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 AL034418.1-201ENST00000448675 860 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 HAR1A.1-201ENST00000459583 118 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 AC008379.1-201ENST00000463655 464 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.66□□□□□ -2.3
PARP4Q9UKK3 RNU6-322P-201ENST00000516010 103 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 RNA5SP337-201ENST00000517007 109 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.66□□□□□ -2.3
PARP4Q9UKK3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.66□□□□□ -2.3
PARP4Q9UKK3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.66□□□□□ -2.3
PARP4Q9UKK3 MIR4422-201ENST00000581938 83 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 AC099842.1-201ENST00000619919 596 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 AP003400.5-201ENST00000624827 617 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 TPTE2P4-201ENST00000258589 1605 ntBASIC0.66□□□□□ -2.3
PARP4Q9UKK3 RNU6-222P-201ENST00000362438 107 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 RNU6-1222P-201ENST00000384615 107 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 RNA5SP63-201ENST00000391225 112 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 RNU4-78P-201ENST00000410940 126 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 RNU6-272P-201ENST00000411028 104 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.65□□□□□ -2.31
PARP4Q9UKK3 NIFKP6-201ENST00000598115 845 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 7SK.7-201ENST00000603504 247 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 AL121890.5-201ENST00000620848 304 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 AP006248.3-201ENST00000623580 594 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 AC068787.1-201ENST00000623908 691 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 AP003399.1-201ENST00000637534 361 ntBASIC0.65□□□□□ -2.31
PARP4Q9UKK3 PIGPP2-201ENST00000411569 458 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AL714022.1-201ENST00000439897 151 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AL035666.1-201ENST00000446195 348 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.64□□□□□ -2.31
PARP4Q9UKK3 DYNLL1P5-201ENST00000467158 270 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AC116337.2-201ENST00000477662 156 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.64□□□□□ -2.31
PARP4Q9UKK3 RNU5F-8P-201ENST00000515941 111 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 SNORA62.5-201ENST00000516634 120 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AC025857.1-201ENST00000525252 377 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AL133241.1-201ENST00000556832 487 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AC022254.1-201ENST00000567857 235 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 DUXAP10-204ENST00000612052 616 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AL049737.1-201ENST00000413920 1403 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.64□□□□□ -2.31
PARP4Q9UKK3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
PARP4Q9UKK3 Y_RNA.294-201ENST00000364916 102 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 USP9YP33-201ENST00000412220 421 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AL109913.1-201ENST00000421173 514 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 VN1R42P-201ENST00000424651 344 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 RPL31P35-201ENST00000431058 377 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 FTH1P12-201ENST00000432137 551 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.64□□□□□ -2.31
PARP4Q9UKK3 USP9YP35-201ENST00000435696 412 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 SNORA48.10-201ENST00000516965 160 ntBASIC0.64□□□□□ -2.31
PARP4Q9UKK3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
PARP4Q9UKK3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.64□□□□□ -2.31
PARP4Q9UKK3 MTND4P12-201ENST00000498999 1377 ntBASIC0.63□□□□□ -2.31
PARP4Q9UKK3 AP000776.1-201ENST00000530032 1663 ntBASIC0.63□□□□□ -2.31
PARP4Q9UKK3 HMGN2P39-201ENST00000398005 273 ntBASIC0.63□□□□□ -2.31
PARP4Q9UKK3 PNPLA4P1-201ENST00000458328 305 ntBASIC0.63□□□□□ -2.31
PARP4Q9UKK3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.63□□□□□ -2.31
PARP4Q9UKK3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.63□□□□□ -2.31
PARP4Q9UKK3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.63□□□□□ -2.31
PARP4Q9UKK3 Z69720.2-201ENST00000624755 279 ntBASIC0.63□□□□□ -2.31
PARP4Q9UKK3 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
PARP4Q9UKK3 RNA5SP125-201ENST00000364843 120 ntBASIC0.62□□□□□ -2.31
PARP4Q9UKK3 MIR30A-201ENST00000385092 71 ntBASIC0.62□□□□□ -2.31
PARP4Q9UKK3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms