Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC063950.1-201ENST00000552036 308 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 MIR4644-201ENST00000579929 84 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 AC018462.2-201ENST00000605375 395 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 MIR6500-201ENST00000622700 86 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 AC244517.12-201ENST00000623581 663 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 RNU6-310P-201ENST00000384655 107 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AL096701.2-201ENST00000416920 238 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AL691449.1-201ENST00000426570 421 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AL358472.1-201ENST00000431295 329 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 TBCAP1-201ENST00000436520 327 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 RNU6-307P-201ENST00000516743 106 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 SNORA31.19-201ENST00000517079 126 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AC009902.1-201ENST00000519351 183 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 MIR3158-1-201ENST00000583596 81 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 MIR5684-201ENST00000585074 65 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AP000654.2-201ENST00000605633 586 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AC009229.3-201ENST00000608056 282 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 MIR6868-201ENST00000611215 58 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 uc_338.32-201ENST00000615087 172 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AC006133.1-201ENST00000617106 264 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 MTND5P19-201ENST00000424872 1794 ntBASIC4.6□□□□□ -1.67
DDX41Q9UJV9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.6□□□□□ -1.67
DDX41Q9UJV9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 SNORA60-201ENST00000362396 134 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 RNU6-213P-201ENST00000384051 104 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 SNORA75B-201ENST00000384053 137 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 RNU6-474P-201ENST00000384243 107 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 MIR10A-201ENST00000385043 110 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 RNA5SP171-201ENST00000391071 115 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AL592148.1-201ENST00000413568 445 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AC097713.2-201ENST00000430199 356 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AL078601.1-201ENST00000444542 271 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 PCMTD1P1-201ENST00000455560 355 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AC084357.1-201ENST00000473404 255 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AC139453.3-201ENST00000493276 369 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AC097473.1-201ENST00000508142 408 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AC026782.1-201ENST00000512952 449 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 RNU6-572P-201ENST00000516724 80 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 RNU1-45P-201ENST00000517191 141 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 MTCO3P13-201ENST00000577757 781 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AC006504.6-201ENST00000590142 199 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 AC064801.1-201ENST00000612025 407 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.59□□□□□ -1.67
DDX41Q9UJV9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
DDX41Q9UJV9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
DDX41Q9UJV9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
DDX41Q9UJV9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
DDX41Q9UJV9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 SNORD14B-201ENST00000364533 90 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 Y_RNA.395-201ENST00000383945 109 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 RNU6-306P-201ENST00000384617 107 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 MIR554-201ENST00000384874 96 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 SNORA40C-201ENST00000391285 128 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 U3.42-201ENST00000408746 214 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 Y_RNA.646-201ENST00000410980 101 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 RPL31P12-201ENST00000422587 358 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 AC236972.1-201ENST00000433225 199 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 MTCO3P10-201ENST00000455912 772 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 AC018437.1-201ENST00000492214 406 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 BTF3L4P4-201ENST00000506381 449 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 HMGN1P11-201ENST00000508668 303 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 RNU1-61P-201ENST00000516107 151 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms