Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AC134050.1-201ENST00000495088 933 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 DBF4P1-201ENST00000412976 1892 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 AC100821.1-201ENST00000523153 2479 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 RNA5SP361-201ENST00000362686 118 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 AL606490.4-201ENST00000423117 127 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 MTCYBP41-201ENST00000528913 1123 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD7Q9P2D1 AC087821.2-201ENST00000637086 450 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD7Q9P2D1 RPL23AP3-201ENST00000453844 468 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD7Q9P2D1 RNU6-322P-201ENST00000516010 103 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 RNU6-347P-201ENST00000516658 105 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 RNU7-193P-201ENST00000516723 65 ntBASIC0.31□□□□□ -2.36
CHD7Q9P2D1 RNU1-96P-201ENST00000364163 162 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 SNORA50A-201ENST00000384225 134 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AC060773.1-201ENST00000421698 310 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 RPL23AP95-201ENST00000426806 265 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 MTND5P8-201ENST00000449817 1083 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 PSMC1P5-201ENST00000512850 177 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AL590705.4-201ENST00000532209 134 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.3□□□□□ -2.36
CHD7Q9P2D1 Y_RNA.572-201ENST00000384757 98 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 MIR10B-201ENST00000385011 110 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 BTF3L4P2-201ENST00000392798 346 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AC010099.3-201ENST00000423896 409 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 NCOR1P1-202ENST00000486162 291 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.3□□□□□ -2.36
CHD7Q9P2D1 SNORA3.4-201ENST00000515969 96 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 uc_338.14-201ENST00000613162 166 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AL161423.1-201ENST00000613700 262 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AC097372.5-201ENST00000623665 376 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
CHD7Q9P2D1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AC097463.2-201ENST00000421074 142 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 RSU1P2-202ENST00000437884 485 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AL157398.1-201ENST00000452981 186 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.3□□□□□ -2.36
CHD7Q9P2D1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.3□□□□□ -2.36
CHD7Q9P2D1 AC073569.3-201ENST00000619055 682 ntBASIC0.3□□□□□ -2.36
CHD7Q9P2D1 MIR1468-201ENST00000410600 86 ntBASIC0.29□□□□□ -2.36
CHD7Q9P2D1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.29□□□□□ -2.36
CHD7Q9P2D1 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.29□□□□□ -2.36
CHD7Q9P2D1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.29□□□□□ -2.36
CHD7Q9P2D1 VN1R82P-201ENST00000601481 356 ntBASIC0.29□□□□□ -2.36
CHD7Q9P2D1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.29□□□□□ -2.36
CHD7Q9P2D1 U3.8-201ENST00000363675 217 ntBASIC0.29□□□□□ -2.36
CHD7Q9P2D1 MIR100-201ENST00000385259 80 ntBASIC0.29□□□□□ -2.36
CHD7Q9P2D1 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
CHD7Q9P2D1 Y_RNA.700-201ENST00000516806 100 ntBASIC0.29□□□□□ -2.36
CHD7Q9P2D1 AC136628.3-201ENST00000521868 290 ntBASIC0.29□□□□□ -2.36
CHD7Q9P2D1 MIR7515-201ENST00000637837 67 ntBASIC0.29□□□□□ -2.36
CHD7Q9P2D1 SNORA4.3-201ENST00000365564 137 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
CHD7Q9P2D1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.28□□□□□ -2.36
CHD7Q9P2D1 AL356776.1-201ENST00000406574 447 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 AC013410.2-201ENST00000422627 201 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.28□□□□□ -2.36
CHD7Q9P2D1 RNU6-112P-201ENST00000363599 104 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 MIR618-201ENST00000385287 98 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 AL117342.1-201ENST00000404861 406 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.28□□□□□ -2.36
CHD7Q9P2D1 AC096649.2-201ENST00000416186 393 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 AL035410.1-201ENST00000427409 427 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.28□□□□□ -2.36
CHD7Q9P2D1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.28□□□□□ -2.36
CHD7Q9P2D1 CENPUP2-201ENST00000555897 1186 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 HMGB1P14-201ENST00000557424 591 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 NIFKP6-201ENST00000598115 845 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 AC068620.3-201ENST00000602749 560 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 AL773524.1-201ENST00000614065 229 ntBASIC0.28□□□□□ -2.36
CHD7Q9P2D1 RNA5SP252-201ENST00000391131 119 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 RPS3AP36-201ENST00000398190 775 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 RPS4XP3-201ENST00000398541 413 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 EIF4EP4-201ENST00000424916 578 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 RNU6-1218P-201ENST00000458990 108 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 MTND4LP3-201ENST00000468320 276 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 RNU6-1073P-201ENST00000517182 106 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 AC007834.2-201ENST00000536310 343 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.27□□□□□ -2.37
CHD7Q9P2D1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
CHD7Q9P2D1 AC110491.1-201ENST00000562191 2010 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 Y_RNA.185-201ENST00000363894 100 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.27□□□□□ -2.37
CHD7Q9P2D1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.27□□□□□ -2.37
CHD7Q9P2D1 CYCTP-201ENST00000504253 315 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms