Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LARP1BP2-201ENST00000486594 519 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC093801.2-201ENST00000503966 1050 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC88CQ9P219 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC108078.2-201ENST00000510750 236 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC079395.1-201ENST00000510981 262 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC88CQ9P219 RNA5SP290-201ENST00000517133 127 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC019176.1-201ENST00000518519 225 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 DEFB130C-202ENST00000530001 230 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC022880.1-201ENST00000534017 973 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.35□□□□□ -2.19
CCDC88CQ9P219 MIR4765-201ENST00000585007 77 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC008121.1-201ENST00000603244 268 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC004908.2-201ENST00000609090 574 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 AC068880.4-201ENST00000623082 495 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
CCDC88CQ9P219 DDX43P2-201ENST00000604753 1354 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
CCDC88CQ9P219 Y_RNA.191-201ENST00000363972 113 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 snoZ40.1-201ENST00000364540 72 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 RNU6-750P-201ENST00000390946 107 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 POLHP1-201ENST00000411806 470 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 MTND4P3-201ENST00000417829 541 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 BPY2DP-201ENST00000422208 265 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 MTCO2P5-201ENST00000422621 426 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC88CQ9P219 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC88CQ9P219 RNU7-136P-201ENST00000458819 69 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AC005410.1-202ENST00000460347 485 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AF213884.2-201ENST00000510417 903 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AF131216.2-201ENST00000512316 564 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 RN7SKP258-201ENST00000517151 304 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.34□□□□□ -2.19
CCDC88CQ9P219 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AC005832.3-201ENST00000537929 631 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC88CQ9P219 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AC025165.5-201ENST00000602802 578 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AC025588.2-201ENST00000604851 466 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AL357080.1-201ENST00000617394 239 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AC025048.6-202ENST00000627667 438 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 AC110491.1-201ENST00000562191 2010 ntBASIC1.34□□□□□ -2.19
CCDC88CQ9P219 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CCDC88CQ9P219 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 RNU6-223P-201ENST00000362830 107 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 RNU5B-1-201ENST00000363286 116 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 RNU6-270P-201ENST00000364131 105 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 U6atac.2-201ENST00000408644 118 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AIMP1P2-201ENST00000425294 312 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 GTF2IP20-201ENST00000431663 360 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 DDX3P2-201ENST00000446138 111 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AC002381.1-201ENST00000447049 280 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AL160314.1-201ENST00000490836 438 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AC024589.1-201ENST00000512207 263 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AL606834.3-201ENST00000602615 496 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AC099785.1-201ENST00000605697 437 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AL138960.2-201ENST00000625145 535 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 MIR1322-201ENST00000638013 71 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 CDR1-202ENST00000625883 1485 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AL079343.1-201ENST00000572358 1771 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 RNY1P10-201ENST00000363268 113 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 RNU4-51P-201ENST00000364206 140 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AL512604.1-201ENST00000404812 257 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 RN7SKP51-201ENST00000410781 304 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 NDUFS5P4-201ENST00000412983 318 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 MTCO2P1-201ENST00000424648 477 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 EIF4EP4-201ENST00000424916 578 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AL513185.2-201ENST00000425543 193 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AP003497.1-201ENST00000528472 562 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AGGF1P5-201ENST00000567900 919 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AC090615.1-201ENST00000577519 154 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AC105245.1-201ENST00000581934 244 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 RNU6-88P-201ENST00000606801 100 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AC018926.1-201ENST00000616335 435 ntBASIC1.33□□□□□ -2.2
CCDC88CQ9P219 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC88CQ9P219 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 SNORD116-12-201ENST00000384468 92 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 MRPS36P1-201ENST00000421291 307 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL512844.2-201ENST00000433990 593 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 PTGES3P1-201ENST00000439531 483 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms