Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 MIR6718-201ENST00000616153 80 ntBASIC0.78□□□□□ -2.28
CCDC180Q9P1Z9 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
CCDC180Q9P1Z9 AC016716.1-201ENST00000265882 708 ntBASIC0.78□□□□□ -2.29
CCDC180Q9P1Z9 Y_RNA.280-201ENST00000364765 112 ntBASIC0.78□□□□□ -2.29
CCDC180Q9P1Z9 AC098614.2-201ENST00000426040 255 ntBASIC0.78□□□□□ -2.29
CCDC180Q9P1Z9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.78□□□□□ -2.29
CCDC180Q9P1Z9 AC093510.2-201ENST00000562820 896 ntBASIC0.78□□□□□ -2.29
CCDC180Q9P1Z9 HMGN1P30-201ENST00000589286 268 ntBASIC0.78□□□□□ -2.29
CCDC180Q9P1Z9 AC009974.1-201ENST00000608881 455 ntBASIC0.78□□□□□ -2.29
CCDC180Q9P1Z9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
CCDC180Q9P1Z9 AC123912.3-201ENST00000600907 1367 ntBASIC0.77□□□□□ -2.29
CCDC180Q9P1Z9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
CCDC180Q9P1Z9 AL589655.1-201ENST00000405398 482 ntBASIC0.77□□□□□ -2.29
CCDC180Q9P1Z9 EDDM3CP-201ENST00000415977 425 ntBASIC0.77□□□□□ -2.29
CCDC180Q9P1Z9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC180Q9P1Z9 AC087481.2-201ENST00000565492 330 ntBASIC0.77□□□□□ -2.29
CCDC180Q9P1Z9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.77□□□□□ -2.29
CCDC180Q9P1Z9 AL009028.1-201ENST00000604895 802 ntBASIC0.77□□□□□ -2.29
CCDC180Q9P1Z9 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC180Q9P1Z9 MIR320B1-201ENST00000390209 79 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 RNU6-837P-201ENST00000391056 108 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 AC092634.2-201ENST00000428146 1010 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 AC008379.1-201ENST00000463655 464 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 AC134050.1-201ENST00000495088 933 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 SNRPGP16-201ENST00000533275 226 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 BNIP3P25-201ENST00000596023 559 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 7SK.7-201ENST00000603504 247 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 AC055764.2-201ENST00000610089 670 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 AC004852.3-201ENST00000614131 326 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 AC012676.2-201ENST00000619258 186 ntBASIC0.76□□□□□ -2.29
CCDC180Q9P1Z9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 HAR1A.1-201ENST00000459583 118 ntBASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 SNORA44.1-201ENST00000517031 108 ntBASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 AP000654.2-201ENST00000605633 586 ntBASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 AC092192.1-201ENST00000633154 1018 ntBASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 AC090666.1-201ENST00000578241 445 ntBASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 MIR3609-201ENST00000582661 80 ntBASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 AP001330.4-201ENST00000604350 154 ntBASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 DUXAP10-204ENST00000612052 616 ntBASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 AC015726.3-201ENST00000624501 418 ntBASIC0.75□□□□□ -2.29
CCDC180Q9P1Z9 Y_RNA.412-201ENST00000384001 104 ntBASIC0.74□□□□□ -2.29
CCDC180Q9P1Z9 MIR32-201ENST00000384965 70 ntBASIC0.74□□□□□ -2.29
CCDC180Q9P1Z9 SSXP10-201ENST00000402595 565 ntBASIC0.74□□□□□ -2.29
CCDC180Q9P1Z9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.74□□□□□ -2.29
CCDC180Q9P1Z9 AL590365.1-201ENST00000450788 243 ntBASIC0.74□□□□□ -2.29
CCDC180Q9P1Z9 AL359385.1-201ENST00000456509 365 ntBASIC0.74□□□□□ -2.29
CCDC180Q9P1Z9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.74□□□□□ -2.29
CCDC180Q9P1Z9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.74□□□□□ -2.29
CCDC180Q9P1Z9 RNU6-1328P-201ENST00000410938 106 ntBASIC0.73□□□□□ -2.29
CCDC180Q9P1Z9 FTH1P12-201ENST00000432137 551 ntBASIC0.73□□□□□ -2.29
CCDC180Q9P1Z9 AL591043.1-201ENST00000432461 424 ntBASIC0.73□□□□□ -2.29
CCDC180Q9P1Z9 MTND5P8-201ENST00000449817 1083 ntBASIC0.73□□□□□ -2.29
CCDC180Q9P1Z9 RPL26P9-201ENST00000457466 433 ntBASIC0.73□□□□□ -2.29
CCDC180Q9P1Z9 AC074051.3-201ENST00000570238 358 ntBASIC0.73□□□□□ -2.29
CCDC180Q9P1Z9 AC096586.2-201ENST00000610260 441 ntBASIC0.73□□□□□ -2.29
CCDC180Q9P1Z9 AL365204.3-201ENST00000612448 685 ntBASIC0.73□□□□□ -2.29
CCDC180Q9P1Z9 AL590410.1-201ENST00000617925 333 ntBASIC0.73□□□□□ -2.29
CCDC180Q9P1Z9 MIR6759-201ENST00000638110 65 ntBASIC0.73□□□□□ -2.29
CCDC180Q9P1Z9 Y_RNA.294-201ENST00000364916 102 ntBASIC0.72□□□□□ -2.29
CCDC180Q9P1Z9 AC009518.2-201ENST00000418056 731 ntBASIC0.72□□□□□ -2.29
CCDC180Q9P1Z9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC180Q9P1Z9 MIR3126-201ENST00000577443 74 ntBASIC0.72□□□□□ -2.29
CCDC180Q9P1Z9 AC025588.2-201ENST00000604851 466 ntBASIC0.72□□□□□ -2.29
CCDC180Q9P1Z9 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CCDC180Q9P1Z9 U3.13-201ENST00000364804 214 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 RNU6-418P-201ENST00000384035 107 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 USP9YP33-201ENST00000412220 421 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 USP9YP35-201ENST00000435696 412 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 AC099513.1-201ENST00000490423 301 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 AC006518.2-201ENST00000542513 940 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 AC007792.1-201ENST00000623023 402 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 AC100821.1-201ENST00000523153 2479 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 AL109913.1-201ENST00000421173 514 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 MTCYBP3-201ENST00000445588 1137 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 AC107626.1-201ENST00000471084 183 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 OR52A4P-202ENST00000481634 799 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 AC010186.2-204ENST00000537668 439 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 XIAPP1-201ENST00000603162 600 ntBASIC0.71□□□□□ -2.3
CCDC180Q9P1Z9 AC019070.1-201ENST00000415008 1024 ntBASIC0.7□□□□□ -2.3
CCDC180Q9P1Z9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.7□□□□□ -2.3
CCDC180Q9P1Z9 AC093106.2-201ENST00000428212 385 ntBASIC0.7□□□□□ -2.3
CCDC180Q9P1Z9 AL157398.1-201ENST00000452981 186 ntBASIC0.7□□□□□ -2.3
CCDC180Q9P1Z9 snoU13.7-201ENST00000459220 104 ntBASIC0.7□□□□□ -2.3
CCDC180Q9P1Z9 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC180Q9P1Z9 AC115085.1-201ENST00000588924 229 ntBASIC0.7□□□□□ -2.3
CCDC180Q9P1Z9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
CCDC180Q9P1Z9 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms