Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC013553.2-201ENST00000604244 589 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC019159.1-201ENST00000605094 187 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AL162274.2-201ENST00000614406 332 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC073534.2-201ENST00000620377 381 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 MIR4275-201ENST00000636486 87 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC092593.1-201ENST00000515413 1815 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 ELF2P3-201ENST00000445099 1506 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 RNU6-1097P-201ENST00000363586 107 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 RNU6-288P-201ENST00000363690 104 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 SNORA24.1-201ENST00000384401 135 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL139397.2-201ENST00000404529 772 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 UBE2V1P8-201ENST00000437166 265 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 RPL7P54-201ENST00000438336 674 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC126182.1-201ENST00000478134 357 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 KC877373.1-201ENST00000479066 408 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC116562.3-201ENST00000506136 177 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC108078.2-201ENST00000510750 236 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 SNORA31.15-201ENST00000516771 132 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AP003072.2-201ENST00000527756 676 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC068587.5-201ENST00000528506 175 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 OR5AL2P-201ENST00000532185 920 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL512360.1-201ENST00000555346 234 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 MIR3921-201ENST00000577308 85 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC008752.3-201ENST00000588113 712 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 ZNF861P-201ENST00000588126 639 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC002545.1-201ENST00000592511 181 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL670379.6-201ENST00000603753 252 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL670379.11-201ENST00000604059 253 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC008162.1-201ENST00000604718 254 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL670379.1-201ENST00000604752 252 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL670379.5-201ENST00000605253 252 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL670379.12-201ENST00000605291 253 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL670379.8-201ENST00000605353 252 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AL670379.7-201ENST00000605823 252 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC090517.2-201ENST00000614966 680 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 AC002064.3-201ENST00000623448 346 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 MTND5P1-201ENST00000445440 1375 ntBASIC2.69□□□□□ -1.98
NDE1Q9NXR1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NDE1Q9NXR1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC073343.1-201ENST00000328239 651 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 MIR6073-201ENST00000352083 89 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 RNU6-1085P-201ENST00000363576 107 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 RNU6-14P-201ENST00000384630 106 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 MIR181A1-201ENST00000385026 110 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 MIR634-201ENST00000385208 97 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 RPS4XP8-201ENST00000402039 771 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC007919.1-201ENST00000429380 217 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 MTND3P21-201ENST00000433774 331 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC092573.2-201ENST00000434546 243 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 FDX1P2-201ENST00000450769 375 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AL162395.1-201ENST00000457882 422 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 MRPS17P3-201ENST00000465453 385 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC092989.1-201ENST00000481235 277 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC117522.1-201ENST00000509821 380 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC074250.1-201ENST00000511117 192 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AL117351.2-201ENST00000513571 157 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 SNORD27.1-201ENST00000516319 72 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 SCARNA15.2-201ENST00000516409 127 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 RNA5SP471-201ENST00000516971 106 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 RN7SKP258-201ENST00000517151 304 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms