Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNA5SP210-201ENST00000391034 120 ntBASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 RNU6-193P-201ENST00000410977 107 ntBASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 RNA5SP492-201ENST00000411330 114 ntBASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 MED13P1-201ENST00000428342 171 ntBASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 AL591704.1-201ENST00000432574 275 ntBASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 AC104850.1-201ENST00000435940 476 ntBASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 AC113155.1-201ENST00000511141 769 ntBASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 RNU6-703P-201ENST00000516946 107 ntBASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 MIR4528-201ENST00000577763 90 ntBASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 MTND4LP5-201ENST00000605152 292 ntBASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMC4Q9NTJ3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 RNU6-859P-201ENST00000362728 107 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 RNY1P12-201ENST00000364251 105 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 MIR558-201ENST00000384920 94 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC093106.2-201ENST00000428212 385 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 RPS15AP5-201ENST00000436276 388 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 MTND4P25-201ENST00000441039 533 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 MTND4P2-201ENST00000507767 1203 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 RNA5SP356-201ENST00000515972 94 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 Vault.3-201ENST00000516676 95 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 RNU6-143P-201ENST00000516942 93 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC022616.3-201ENST00000523940 148 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AP003072.2-201ENST00000527756 676 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 HSPE1P20-201ENST00000538133 289 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 MIR4319-201ENST00000577285 85 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC010620.2-201ENST00000600135 313 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC090578.1-201ENST00000604955 591 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC110994.2-201ENST00000635481 492 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 AC138915.1-201ENST00000565427 1685 ntBASIC3.36□□□□□ -1.87
SMC4Q9NTJ3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 SNORA20.2-201ENST00000383922 131 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 Y_RNA.436-201ENST00000384097 102 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AL109913.1-201ENST00000421173 514 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AL358075.3-201ENST00000426289 226 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AC009414.1-201ENST00000427200 443 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 ISCA1P6-201ENST00000427740 390 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AL589823.1-201ENST00000429577 183 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 DLGAP5P1-201ENST00000430307 464 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 ARL5AP4-201ENST00000430731 512 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AL591212.2-201ENST00000433923 257 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AC011816.1-201ENST00000441346 546 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AC244505.5-201ENST00000443639 207 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 TPT1P7-201ENST00000458300 517 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 UBE2DNL-203ENST00000474922 222 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AC004924.1-201ENST00000480160 781 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 RPS29P20-201ENST00000489592 171 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 ARL2BPP4-201ENST00000506854 471 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 RPL23AP94-201ENST00000512518 302 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 HMGB1P41-201ENST00000520234 440 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AP003122.3-201ENST00000526316 255 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AC084851.1-201ENST00000529105 249 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AP000873.5-201ENST00000533906 236 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AC137800.2-201ENST00000574375 120 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AL035413.2-201ENST00000604801 525 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 AC006566.1-201ENST00000608943 513 ntBASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SMC4Q9NTJ3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 RNU6-288P-201ENST00000363690 104 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 Y_RNA.201-201ENST00000364052 96 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 RNU6-188P-201ENST00000364207 107 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 RNU4-75P-201ENST00000364621 146 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 RNU6-190P-201ENST00000384154 102 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms