Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 OR5B19P-201ENST00000531766 928 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 RPL23AP84-201ENST00000571193 464 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AP002826.1-201ENST00000608835 315 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AP001486.3-201ENST00000615334 372 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC002553.4-201ENST00000616896 331 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC002076.2-201ENST00000617362 122 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AC025034.2-201ENST00000623264 286 ntBASIC2.89□□□□□ -1.95
SIX2Q9NPC8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX2Q9NPC8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 CKAP2P1-201ENST00000555477 2049 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 ZNF807-201ENST00000328088 1707 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC004520.1-201ENST00000608362 1413 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 Y_RNA.38-201ENST00000362617 102 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 RNU6-14P-201ENST00000384630 106 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 RNU2-71P-201ENST00000411395 189 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AL513331.1-201ENST00000411908 397 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 USP9YP6-201ENST00000413550 854 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 GTF2IP20-201ENST00000431663 360 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 SEPT14P3-201ENST00000439401 183 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 NEFMP1-201ENST00000443423 1006 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AL732372.2-207ENST00000445840 183 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 SEPT14P2-201ENST00000453405 183 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 RPS29P15-201ENST00000458329 171 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 snoU13.22-201ENST00000459428 104 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 GMFBP1-201ENST00000467831 427 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC078785.3-201ENST00000476607 425 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 RPS29P25-201ENST00000481709 171 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC116353.2-201ENST00000505332 712 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC108078.2-201ENST00000510750 236 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 SEPT14P4-201ENST00000513445 186 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC105417.1-201ENST00000514691 285 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 RN7SKP132-201ENST00000516001 208 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 SCARNA15.2-201ENST00000516409 127 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC134698.4-201ENST00000523451 826 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 FO082796.1-201ENST00000523795 183 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 OR5AL2P-201ENST00000532185 920 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 MIR3200-201ENST00000580767 85 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AL033523.1-201ENST00000605153 153 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC006023.2-201ENST00000609916 167 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AL354950.2-201ENST00000617939 290 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 YWHAEP7-203ENST00000622054 312 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 AC007998.5-201ENST00000622938 237 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 SNORA50A-202ENST00000629536 136 ntBASIC2.88□□□□□ -1.95
SIX2Q9NPC8 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SIX2Q9NPC8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 RNY3P3-201ENST00000363816 102 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 Y_RNA.255-201ENST00000364581 97 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 RNU6-996P-201ENST00000365438 107 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 MIR1290-201ENST00000408735 78 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 NDUFB4P7-201ENST00000423198 363 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 MTCO2P3-201ENST00000442543 421 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AC073415.1-201ENST00000449240 153 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 RPL23AP62-201ENST00000463396 453 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 RPL31P58-201ENST00000469001 379 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AL163973.1-201ENST00000484753 577 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AC069439.1-201ENST00000494739 167 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 RNA5SP468-201ENST00000516782 93 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 RN7SKP219-201ENST00000516825 296 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 ELOCP31-201ENST00000540463 467 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 MIR4635-201ENST00000583759 79 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AP001029.3-201ENST00000588063 596 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 BNIP3P30-201ENST00000601184 574 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AL365204.3-201ENST00000612448 685 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AC090132.2-201ENST00000615881 347 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AC011155.2-201ENST00000623202 216 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 U6.98-201ENST00000637157 84 ntBASIC2.87□□□□□ -1.95
SIX2Q9NPC8 AL161431.1-201ENST00000618966 4205 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms