Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Y_RNA.356-201ENST00000365475 113 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 RNU6-128P-201ENST00000383976 107 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 U3.42-201ENST00000408746 214 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 BX323014.1-201ENST00000412876 237 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 RPL21P90-201ENST00000415692 466 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 AL353621.1-201ENST00000418219 243 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.02□□□□□ -1.77
VTA1Q9NP79 AC005326.1-201ENST00000429197 123 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.02□□□□□ -1.77
VTA1Q9NP79 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.02□□□□□ -1.77
VTA1Q9NP79 NDUFB1P1-201ENST00000435191 180 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 NDUFB1P2-201ENST00000449477 176 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 AMD1P1-201ENST00000457220 922 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 PPP1R2P5-201ENST00000457256 603 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 RN7SL807P-201ENST00000470923 297 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 RPS23P3-201ENST00000470993 430 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 RPL21P13-201ENST00000488305 481 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.02□□□□□ -1.77
VTA1Q9NP79 AC112206.3-201ENST00000514578 389 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 RNU2-27P-201ENST00000516185 142 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 AC105029.1-201ENST00000520250 669 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.02□□□□□ -1.77
VTA1Q9NP79 HMGB1P14-201ENST00000557424 591 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 AC012119.1-201ENST00000603184 222 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 MIR8058-201ENST00000615737 89 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.02□□□□□ -1.77
VTA1Q9NP79 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.02□□□□□ -1.77
VTA1Q9NP79 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VTA1Q9NP79 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
VTA1Q9NP79 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VTA1Q9NP79 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
VTA1Q9NP79 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.02□□□□□ -1.77
VTA1Q9NP79 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VTA1Q9NP79 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VTA1Q9NP79 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
VTA1Q9NP79 MIR412-201ENST00000362142 91 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 RNU6-254P-201ENST00000363377 107 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VTA1Q9NP79 SNORD17-201ENST00000390930 237 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 RNA5SP120-201ENST00000410900 112 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 RNU6-607P-201ENST00000411283 108 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 HMGB1P18-201ENST00000438801 619 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 UBE2V1P7-201ENST00000446395 340 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 U3.44-201ENST00000458938 192 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 AC025518.1-201ENST00000479856 347 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 AC026801.1-201ENST00000497178 464 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 SUMO2P6-201ENST00000505273 288 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 RNU6-1069P-201ENST00000516612 133 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 RNU6-579P-201ENST00000516879 102 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 LRRC37A5P-203ENST00000580181 585 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 AC136601.2-201ENST00000604356 474 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 AL132765.2-201ENST00000610812 351 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 AC104237.2-201ENST00000612456 443 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 AF117829.1-206ENST00000621883 3802 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 AC005183.1-201ENST00000603687 1979 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 AC007656.2-201ENST00000624902 4547 ntBASIC4.01□□□□□ -1.77
VTA1Q9NP79 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.01□□□□□ -1.77
VTA1Q9NP79 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4□□□□□ -1.77
VTA1Q9NP79 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4□□□□□ -1.77
VTA1Q9NP79 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VTA1Q9NP79 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4□□□□□ -1.77
VTA1Q9NP79 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4□□□□□ -1.77
VTA1Q9NP79 Y_RNA.301-201ENST00000364990 103 ntBASIC4□□□□□ -1.77
VTA1Q9NP79 AL122016.1-201ENST00000403365 367 ntBASIC4□□□□□ -1.77
VTA1Q9NP79 RNU2-68P-201ENST00000410878 191 ntBASIC4□□□□□ -1.77
VTA1Q9NP79 AL360271.2-201ENST00000447710 161 ntBASIC4□□□□□ -1.77
VTA1Q9NP79 RPL7P5-201ENST00000471472 736 ntBASIC4□□□□□ -1.77
VTA1Q9NP79 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4□□□□□ -1.77
VTA1Q9NP79 AC103851.1-201ENST00000506833 274 ntBASIC4□□□□□ -1.77
VTA1Q9NP79 AC087854.1-201ENST00000519706 414 ntBASIC4□□□□□ -1.77
VTA1Q9NP79 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4□□□□□ -1.77
VTA1Q9NP79 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4□□□□□ -1.77
VTA1Q9NP79 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4□□□□□ -1.77
VTA1Q9NP79 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4□□□□□ -1.77
VTA1Q9NP79 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4□□□□□ -1.77
VTA1Q9NP79 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4□□□□□ -1.77
VTA1Q9NP79 DUSP12P1-201ENST00000612874 516 ntBASIC4□□□□□ -1.77
VTA1Q9NP79 RMST_4.1-201ENST00000616886 107 ntBASIC4□□□□□ -1.77
VTA1Q9NP79 U4.6-201ENST00000621618 127 ntBASIC4□□□□□ -1.77
VTA1Q9NP79 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4□□□□□ -1.77
VTA1Q9NP79 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4□□□□□ -1.77
VTA1Q9NP79 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4□□□□□ -1.77
VTA1Q9NP79 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
VTA1Q9NP79 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4□□□□□ -1.77
VTA1Q9NP79 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VTA1Q9NP79 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
VTA1Q9NP79 RPS4XP5-202ENST00000449995 1334 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms