Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MIR6873-201ENST00000622788 63 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 RNU6-462P-201ENST00000362659 105 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 RNU6-658P-201ENST00000384606 106 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AL021407.1-201ENST00000404531 386 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 RNU2-63P-201ENST00000410792 194 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 MORF4L1P6-201ENST00000418771 268 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 PTGES3P4-201ENST00000426243 356 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 RPL36AP53-201ENST00000432891 316 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 RPL9P6-201ENST00000492764 598 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC008526.1-201ENST00000509149 338 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AP003467.2-201ENST00000520175 319 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 RANP3-201ENST00000530970 276 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC026464.5-201ENST00000562497 722 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AL391001.1-201ENST00000602747 715 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC091152.3-201ENST00000604227 325 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC103710.1-201ENST00000610003 901 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 TUSC7.1-201ENST00000610969 165 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AC097655.1-201ENST00000635075 318 ntBASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
TM9SF3Q9HD45 AL109809.4-201ENST00000603520 2185 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC005336.3-201ENST00000623833 2679 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 SNORD113-6-201ENST00000363345 75 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 RNU6-931P-201ENST00000363850 107 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 RNU6-660P-201ENST00000364566 109 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 USP9YP6-201ENST00000413550 854 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC011233.1-201ENST00000422812 283 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AL022400.1-201ENST00000423946 935 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC093106.2-201ENST00000428212 385 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 HMGB1P27-201ENST00000431429 603 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 snoU13.23-201ENST00000458863 104 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC034244.1-201ENST00000507687 207 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 MRPS33P3-201ENST00000513456 322 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 RN7SKP258-201ENST00000517151 304 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AL121821.2-201ENST00000556081 394 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC021171.1-201ENST00000603137 706 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AL161798.1-201ENST00000604630 131 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 BCRP9-201ENST00000605312 388 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC012150.2-201ENST00000621300 544 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC068787.1-201ENST00000623908 691 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AP003400.5-201ENST00000624827 617 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC104454.1-201ENST00000421341 1401 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
TM9SF3Q9HD45 AC092125.1-201ENST00000562568 1995 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 HSPA8P4-201ENST00000511877 1920 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 SNORD114-1-201ENST00000362705 72 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 RNU6-1214P-201ENST00000363650 109 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AL079342.1-201ENST00000401460 267 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 MIR1302-8-201ENST00000408342 128 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 RPL22P18-201ENST00000417197 377 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 HMGN2P3-201ENST00000433603 273 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 HMGN2P5-201ENST00000436882 273 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AC004383.1-201ENST00000438135 289 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 MTATP6P30-201ENST00000443540 664 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 Z73417.1-201ENST00000447373 778 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 RNU7-59P-201ENST00000459101 61 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 Y_RNA.638-201ENST00000459374 113 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AC068781.1-201ENST00000488231 618 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 CKS1BP2-201ENST00000497342 240 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AF213884.2-201ENST00000510417 903 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms