Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 TUG1_2.1-201ENST00000614234 87 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC104010.1-201ENST00000616889 150 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC112204.3-201ENST00000623822 332 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC110994.2-201ENST00000635481 492 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 MIR219B-201ENST00000637023 88 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 MTND4P4-201ENST00000439033 1366 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 RNU4-21P-201ENST00000362802 126 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 SNORA23-201ENST00000365128 182 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 RNU6-809P-201ENST00000384461 107 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AL109755.1-201ENST00000401791 649 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AC099548.1-201ENST00000421443 426 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 CYCSP46-201ENST00000423569 204 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AL353777.1-201ENST00000425552 326 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 FDX1P2-201ENST00000450769 375 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 RNU7-59P-201ENST00000459101 61 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 UBL5P3-201ENST00000475112 231 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AC112204.1-201ENST00000502591 103 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 HSPE1P18-201ENST00000517602 280 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AP000889.2-201ENST00000532684 490 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AL158827.2-201ENST00000602494 330 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AC105129.3-201ENST00000605455 485 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AC027807.2-201ENST00000616099 408 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 AL691447.3-201ENST00000635020 330 ntBASIC2.32□□□□□ -2.04
NXF3Q9H4D5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.32□□□□□ -2.04
NXF3Q9H4D5 RNU5F-7P-201ENST00000363696 115 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 RNU5A-8P-201ENST00000364102 114 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 RNU5E-5P-201ENST00000365379 116 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 RNU6-533P-201ENST00000384144 107 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 RNU6-217P-201ENST00000384164 104 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 MIR325-201ENST00000385260 98 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 SNORA26.8-201ENST00000391306 124 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AL021407.1-201ENST00000404531 386 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 GSTA9P-201ENST00000406231 611 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 Y_RNA.608-201ENST00000410647 95 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC244035.1-201ENST00000430042 390 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 COX6CP12-201ENST00000446748 202 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AL118520.1-201ENST00000450770 291 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AL590365.1-201ENST00000450788 243 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 RPS15AP36-201ENST00000492022 382 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC107222.1-201ENST00000510899 637 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 SNORA31.11-201ENST00000516528 139 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 COX6CP5-201ENST00000527162 228 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC087241.2-201ENST00000535801 324 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 GLYCAM1-201ENST00000546596 285 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AL356432.3-201ENST00000568952 465 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC012065.4-201ENST00000602445 679 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC138749.5-201ENST00000611461 208 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC011890.2-201ENST00000613393 294 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 AC116165.2-201ENST00000616705 206 ntBASIC2.31□□□□□ -2.04
NXF3Q9H4D5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NXF3Q9H4D5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 SNORA68.1-201ENST00000364537 132 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 RNU6-443P-201ENST00000384780 107 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 SNORA48.3-201ENST00000391081 134 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 UBE2FP1-201ENST00000416536 447 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 HMGN2P3-201ENST00000433603 273 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 HMGN2P5-201ENST00000436882 273 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 MTCO3P45-201ENST00000443036 613 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms