Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC006362.1-201ENST00000567392 174 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX25Q9H3E2 AC098614.4-201ENST00000607601 462 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 DUSP12P1-201ENST00000612874 516 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 MIR6852-201ENST00000621699 66 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 CR381653.2-201ENST00000624041 768 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 AC090582.1-201ENST00000636321 199 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 AP003399.1-201ENST00000637534 361 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 ASNSP3-201ENST00000451989 1306 ntBASIC2.81□□□□□ -1.96
SNX25Q9H3E2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 SNORD62.1-201ENST00000362541 86 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 RNU6-1027P-201ENST00000383998 107 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 RPLP0P7-201ENST00000416050 667 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 MTCO2P34-201ENST00000421994 607 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 HMGN2P30-201ENST00000423237 256 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 RPL36AP53-201ENST00000432891 316 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 KATNBL1P3-201ENST00000443475 909 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 MTND1P27-201ENST00000451117 902 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC008571.1-201ENST00000467232 300 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 RPL36AP51-201ENST00000487216 318 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 RPS27AP10-201ENST00000496103 208 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 SUMO2P6-201ENST00000505273 288 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC009901.1-201ENST00000506703 541 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC114786.4-201ENST00000508771 728 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 RNU6-703P-201ENST00000516946 107 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AP003072.2-201ENST00000527756 676 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AP002963.1-201ENST00000530590 184 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 RPL12P50-201ENST00000603116 116 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AL121992.2-201ENST00000606262 256 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC022893.3-201ENST00000607665 437 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC008669.1-201ENST00000565823 2178 ntBASIC2.8□□□□□ -1.96
SNX25Q9H3E2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
SNX25Q9H3E2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 ELF2P3-201ENST00000445099 1506 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 Y_RNA.51-201ENST00000362725 102 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 RNY1P12-201ENST00000364251 105 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 RNU1-73P-201ENST00000383971 164 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AL139039.1-201ENST00000401900 692 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AL139095.1-201ENST00000404326 391 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 RNU2-39P-201ENST00000410604 198 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 CDK8P2-201ENST00000415020 547 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 BPY2DP-201ENST00000422208 265 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 GTF2IP20-201ENST00000431663 360 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AL591212.2-201ENST00000433923 257 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 MTND4P32-201ENST00000437189 1237 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 MTND1P29-201ENST00000448112 647 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AC079448.1-201ENST00000449377 373 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AC093899.1-201ENST00000457984 376 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AC092798.1-201ENST00000458542 409 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 RPS27P26-201ENST00000494583 239 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 Y_RNA.689-201ENST00000516589 107 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 RNU6-677P-201ENST00000516914 101 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 BNIP3P9-201ENST00000603714 553 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AC099842.1-201ENST00000619919 596 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 Z99571.1-201ENST00000636677 394 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 AL136360.1-201ENST00000503377 1900 ntBASIC2.79□□□□□ -1.96
SNX25Q9H3E2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.79□□□□□ -1.96
SNX25Q9H3E2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 SNORA4.3-201ENST00000365564 137 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 SNORA24.1-201ENST00000384401 135 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 DEFB108C-201ENST00000400154 252 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 RPS4XP8-201ENST00000402039 771 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 MIR1289-1-201ENST00000408836 144 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms