Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC072039.1-201ENST00000477611 581 ntBASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 AP006587.4-201ENST00000526053 529 ntBASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 AP003122.3-201ENST00000526316 255 ntBASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 AL356432.3-201ENST00000568952 465 ntBASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 AP001004.1-201ENST00000582468 324 ntBASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 AC008751.2-201ENST00000597885 980 ntBASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 BNIP3P9-201ENST00000603714 553 ntBASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 AC007938.3-201ENST00000604965 623 ntBASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 IGHVIII-44-202ENST00000636235 289 ntBASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
POLR1EQ9GZS1 AL109809.4-201ENST00000603520 2185 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 RNU4-82P-201ENST00000362443 140 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 RNY4P24-201ENST00000362735 96 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 RNU1-51P-201ENST00000365345 176 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 RPS20P2-201ENST00000402520 389 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AC107081.1-201ENST00000414975 361 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 MORF4L1P6-201ENST00000418771 268 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AC011233.1-201ENST00000422812 283 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 RAC1P6-201ENST00000423911 575 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AL592045.1-201ENST00000429867 352 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 TIMM9P1-201ENST00000436122 256 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 RNU6-953P-201ENST00000459154 107 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AC118465.1-201ENST00000513820 1271 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 RNU6-581P-201ENST00000516214 105 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AC123904.2-201ENST00000548059 300 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AL133241.1-201ENST00000556832 487 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 ROCK1P1-201ENST00000573767 549 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 MIR4782-201ENST00000577987 79 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 KC877982.1-201ENST00000602313 470 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 AC112187.2-201ENST00000604345 283 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
POLR1EQ9GZS1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
POLR1EQ9GZS1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 RNA5SP289-201ENST00000362332 137 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 RNU6-288P-201ENST00000363690 104 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 MIR1302-8-201ENST00000408342 128 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 HIGD1AP15-201ENST00000416198 280 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 RPS3AP44-201ENST00000425466 790 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL593851.1-201ENST00000426171 157 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 UBE2D3P1-201ENST00000436669 444 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL008629.1-201ENST00000438615 184 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL591719.1-201ENST00000444669 744 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AC116347.2-201ENST00000514912 523 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 RNU6-1003P-201ENST00000517099 105 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 EEF1A1P37-201ENST00000522748 715 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AC022022.2-201ENST00000602989 360 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL670379.6-201ENST00000603753 252 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL670379.11-201ENST00000604059 253 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AC008162.1-201ENST00000604718 254 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL670379.1-201ENST00000604752 252 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL670379.5-201ENST00000605253 252 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL670379.12-201ENST00000605291 253 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL670379.8-201ENST00000605353 252 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AL670379.7-201ENST00000605823 252 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 MIR6766-201ENST00000622641 72 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 FRG1KP-201ENST00000623592 341 ntBASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.33□□□□□ -2.04
POLR1EQ9GZS1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms