Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
TRIM4Q9C037 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM4Q9C037 RNU6-481P-201ENST00000384194 107 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 MTATP6P27-201ENST00000416987 621 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 MTCO3P46-201ENST00000425787 232 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 FABP5P14-201ENST00000437273 393 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM4Q9C037 RPS15AP36-201ENST00000492022 382 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 BOLA3P3-201ENST00000505182 232 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM4Q9C037 TPT1P8-201ENST00000510120 555 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 NRON-201ENST00000517270 370 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM4Q9C037 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.56□□□□□ -2.16
TRIM4Q9C037 AC016957.1-201ENST00000534895 309 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AC015720.1-201ENST00000565251 277 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AC012435.1-202ENST00000568772 240 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.56□□□□□ -2.16
TRIM4Q9C037 AC098848.2-201ENST00000588023 330 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AC136443.5-201ENST00000603741 370 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AP003973.1-201ENST00000604639 691 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AL138963.2-201ENST00000605137 226 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AL158211.4-201ENST00000606988 584 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AL121652.1-201ENST00000608851 448 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AC022202.1-201ENST00000613515 211 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 AC095038.3-201ENST00000634439 195 ntBASIC1.56□□□□□ -2.16
TRIM4Q9C037 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM4Q9C037 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM4Q9C037 UBE2L2-201ENST00000254302 429 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 HMGN2P39-201ENST00000398005 273 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AL356421.1-201ENST00000403255 413 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 TAF13P2-201ENST00000416876 286 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC002381.1-201ENST00000447049 280 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 COX6CP18-201ENST00000448769 222 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC026410.2-201ENST00000460281 156 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM4Q9C037 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM4Q9C037 AP001269.3-201ENST00000588718 329 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC005261.5-201ENST00000596280 355 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.55□□□□□ -2.16
TRIM4Q9C037 AL773524.1-201ENST00000614065 229 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AL118556.2-201ENST00000614375 824 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AL596245.1-201ENST00000618994 362 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC024581.2-201ENST00000619986 252 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM4Q9C037 MIR3199-2-201ENST00000636243 86 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
TRIM4Q9C037 AC006026.1-201ENST00000444025 1803 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.54□□□□□ -2.16
TRIM4Q9C037 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 RNU1-62P-201ENST00000362599 164 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 RNU6-1066P-201ENST00000363573 105 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 Y_RNA.548-201ENST00000384656 105 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 RNU6-174P-201ENST00000410406 106 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 USP9YP19-201ENST00000412165 485 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 OR9R1P-201ENST00000412200 877 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 USP9YP13-201ENST00000417797 480 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 AL158823.1-201ENST00000418441 478 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 AC017099.1-201ENST00000448261 1028 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM4Q9C037 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM4Q9C037 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.54□□□□□ -2.16
TRIM4Q9C037 AC008834.1-201ENST00000511612 175 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 RNU6-840P-201ENST00000517275 65 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM4Q9C037 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.54□□□□□ -2.16
TRIM4Q9C037 AL160236.1-201ENST00000556317 195 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM4Q9C037 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.54□□□□□ -2.16
TRIM4Q9C037 AC009233.1-201ENST00000616477 371 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 MIR4275-201ENST00000636486 87 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
TRIM4Q9C037 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.54□□□□□ -2.16
TRIM4Q9C037 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM4Q9C037 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRIM4Q9C037 U3.13-201ENST00000364804 214 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 RNU1-39P-201ENST00000383897 165 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 RNU6-883P-201ENST00000384597 107 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 RNU6-748P-201ENST00000384648 107 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 ERHP2-201ENST00000402323 299 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 RNU4-27P-201ENST00000410889 139 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 RNA5SP450-201ENST00000411206 102 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 NDUFS5P4-201ENST00000412983 318 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 AL513185.2-201ENST00000425543 193 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 SKA2P1-201ENST00000425592 390 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 AC118469.1-201ENST00000442943 488 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 OFD1P3Y-201ENST00000453312 783 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 AC069528.1-202ENST00000482888 637 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms