Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 USP9YP30-201ENST00000430729 455 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 MTCYBP6-201ENST00000441810 138 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 SSXP4-201ENST00000451349 245 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 RPL26P9-201ENST00000457466 433 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 RPL35AP15-201ENST00000468042 339 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 RPS29P20-201ENST00000489592 171 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 RN7SL810P-201ENST00000493031 276 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 UBE2CP3-201ENST00000502715 450 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 MTCYBP40-201ENST00000509390 1135 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.670-201ENST00000516255 105 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 AL121821.2-201ENST00000556081 394 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 AL391261.3-201ENST00000557194 520 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 LINC00933-203ENST00000559812 219 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 IPO5P1-202ENST00000600039 287 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 MTND4LP5-201ENST00000605152 292 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 AC009229.3-201ENST00000608056 282 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 AC019193.3-201ENST00000609144 554 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 AL157817.1-201ENST00000614264 790 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 AC244517.12-201ENST00000623581 663 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 SCARNA4-202ENST00000625402 129 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 Z82217.1-201ENST00000625157 8149 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.187-201ENST00000363918 113 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 RNU6-898P-201ENST00000365627 104 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 MIR518D-201ENST00000385014 87 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 RNU6-1106P-201ENST00000390845 107 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AL138878.1-201ENST00000405131 347 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.646-201ENST00000410980 101 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AC097713.2-201ENST00000430199 356 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AL132765.1-201ENST00000434165 553 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AC098831.1-201ENST00000440661 216 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 BTF3P15-201ENST00000455606 336 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 SNORD5.1-201ENST00000458800 75 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.639-201ENST00000458981 102 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 SLC25A15P5-201ENST00000508033 253 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AC093303.1-201ENST00000514549 295 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 MIR2114-201ENST00000516645 80 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AP000827.1-201ENST00000527814 258 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AC006064.5-201ENST00000541782 248 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AC106785.1-201ENST00000565935 262 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 PISRT1.1-201ENST00000616930 107 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AC068831.7-201ENST00000616954 363 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 MTND5P7-201ENST00000413558 1798 ntBASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM55Q9BYV6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
TRIM55Q9BYV6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.21□□□□□ -1.73
TRIM55Q9BYV6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 MIR369-201ENST00000362155 70 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 SNORA63-201ENST00000363450 132 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 Y_RNA.146-201ENST00000363549 102 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 RNU5E-7P-201ENST00000365290 117 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 MIR3074-201ENST00000384885 81 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 MIR134-201ENST00000385258 73 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 U3.37-201ENST00000408528 213 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 RNU6-325P-201ENST00000411132 105 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 RPL23AP26-201ENST00000412728 464 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 RPL31P12-201ENST00000422587 358 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 AC236972.1-201ENST00000433225 199 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 AC011998.1-201ENST00000433403 117 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 PHBP16-201ENST00000446318 950 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 PCMTD1P1-201ENST00000455560 355 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 snoU13.28-201ENST00000459235 104 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 RNU6-1037P-201ENST00000459571 107 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 RN7SL98P-201ENST00000462271 300 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 AC128713.1-201ENST00000471495 306 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 RPL7P42-201ENST00000481005 679 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 AC105137.1-201ENST00000484355 562 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 AC109479.2-201ENST00000517842 174 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 AL442663.2-201ENST00000554385 511 ntBASIC4.21□□□□□ -1.74
TRIM55Q9BYV6 AC025884.1-201ENST00000556034 378 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms