Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 FAM27E2-201ENST00000619668 403 ntBASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 MIR6839-201ENST00000620425 113 ntBASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 AC024884.1-201ENST00000620583 399 ntBASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 AC008785.1-201ENST00000624475 456 ntBASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 AC106871.1-201ENST00000568324 3102 ntBASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 MAPK10-303ENST00000641324 3959 ntBASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
LCE3DQ9BYE3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 CUL1P1-201ENST00000509510 2425 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 SNORD56.1-201ENST00000362913 68 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNU6-626P-201ENST00000363354 107 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 Y_RNA.170-201ENST00000363746 110 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNU6-704P-201ENST00000364162 103 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 Y_RNA.291-201ENST00000364886 113 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 Y_RNA.304-201ENST00000365011 112 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNA5SP240-201ENST00000365355 128 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNA5SP77-201ENST00000365394 120 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNA5SP167-201ENST00000365461 116 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNU6-81P-201ENST00000365608 104 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNU6-187P-201ENST00000384139 106 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 SNORA1.3-201ENST00000384676 136 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 MIR551A-201ENST00000385042 96 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 MIR325-201ENST00000385260 98 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 SNORA40.19-201ENST00000390846 128 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNU6-1248P-201ENST00000391096 64 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNU6-918P-201ENST00000391219 106 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 FTH1P15-201ENST00000406984 280 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 MIR1266-201ENST00000408125 84 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 MIR320B2-201ENST00000408479 138 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNU2-20P-201ENST00000410425 191 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNU6-1135P-201ENST00000411083 103 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RN7SKP100-201ENST00000411258 284 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 HMGN1P20-201ENST00000411849 300 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 FAR2P2-201ENST00000413041 594 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 COX6CP10-201ENST00000416832 224 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 BPY2DP-201ENST00000422208 265 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC007161.1-204ENST00000423039 460 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC245028.1-201ENST00000423259 256 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC012306.1-201ENST00000423267 114 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL732292.1-201ENST00000426692 226 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC068287.1-201ENST00000430283 295 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC005154.2-201ENST00000438110 379 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 POLR2KP2-201ENST00000438155 177 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC019185.3-201ENST00000438805 323 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 UQCRBP2-201ENST00000447827 297 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 PPIAP32-201ENST00000449940 472 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 PRELID1P3-201ENST00000450055 643 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 NUTF2P7-201ENST00000453086 375 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL389915.2-201ENST00000454576 441 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RPL26P9-201ENST00000457466 433 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 snoU13.14-201ENST00000459372 104 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RPL32P34-201ENST00000486380 400 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms