Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC009296.1-201ENST00000443146 155 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 RN7SL98P-201ENST00000462271 300 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 RN7SL188P-201ENST00000469842 285 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 UBE2DNL-203ENST00000474922 222 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 AC098976.1-201ENST00000513014 541 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 RNU6-191P-201ENST00000516295 94 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 MIR1273C-201ENST00000578669 77 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 AL391261.4-201ENST00000616012 481 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 AC092593.1-201ENST00000515413 1815 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 RNU6-213P-201ENST00000384051 104 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 FTLP19-201ENST00000433300 394 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 AP001486.1-201ENST00000463339 476 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 RNU6-1114P-201ENST00000516022 107 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 MTND5P34-201ENST00000568888 325 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 AC104984.5-201ENST00000586878 94 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 AL161629.2-201ENST00000615347 275 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 AC019206.1-201ENST00000621938 425 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 SCARNA4-201ENST00000629045 128 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 OR14L1P-202ENST00000641545 3009 ntBASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL25A1Q9BXS0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 BCORP1-203ENST00000513194 5093 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AC005005.4-201ENST00000623789 16698 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 RNU6-1272P-201ENST00000362776 107 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 RNU6-263P-201ENST00000363811 107 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 SNORD73B-201ENST00000364394 72 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 MIR135A2-201ENST00000384854 100 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AL592045.1-201ENST00000429867 352 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 COX6B1P7-201ENST00000430845 235 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AC090774.1-201ENST00000435925 246 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AC090602.1-201ENST00000469695 252 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AP000870.1-201ENST00000472927 406 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 RPL21P13-201ENST00000488305 481 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 FTH1P24-201ENST00000503502 462 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 RNU6-1315P-201ENST00000517187 99 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AC008694.2-201ENST00000517591 306 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AC090049.2-201ENST00000550377 109 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AC005476.1-201ENST00000554427 397 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AC107294.1-201ENST00000609524 467 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 AC090617.7-201ENST00000623952 126 ntBASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.88□□□□□ -1.63
COL25A1Q9BXS0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms