Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 RPL23AP41-201ENST00000484754 458 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC109486.1-201ENST00000486833 374 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC139453.3-201ENST00000493276 369 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC093281.2-201ENST00000510153 597 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 RNA5SP216-201ENST00000516111 123 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC090079.2-201ENST00000575289 768 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AL096840.1-201ENST00000603287 93 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AL121895.2-201ENST00000619558 447 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AL356266.1-201ENST00000623311 483 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 RNA5SP240-201ENST00000365355 128 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 RNU6-748P-201ENST00000384648 107 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AIMP1P2-201ENST00000425294 312 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 TOMM20P4-201ENST00000427861 435 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 RPS25P9-201ENST00000435591 252 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 RPS15AP9-201ENST00000439856 381 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC005094.1-201ENST00000440420 368 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC009238.1-201ENST00000442165 424 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC010095.1-201ENST00000443543 144 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC009237.6-201ENST00000446969 424 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC092001.1-201ENST00000453012 261 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 RPL21P134-201ENST00000453468 483 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC107032.1-201ENST00000485945 480 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 RN7SL274P-201ENST00000492268 272 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 HMGB3P17-201ENST00000504195 649 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 RPF2P2-201ENST00000504693 896 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC116353.3-201ENST00000511215 249 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 SMURF2P1-201ENST00000514992 481 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 RNU2-19P-201ENST00000517288 84 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC012213.3-201ENST00000577199 777 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 MIR4529-201ENST00000578110 78 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC104984.5-201ENST00000586878 94 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 BNIP3P23-201ENST00000599655 511 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AL158827.2-201ENST00000602494 330 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AL596327.1-201ENST00000603629 213 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AL627230.6-201ENST00000611129 280 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC009233.1-201ENST00000616477 371 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AL138955.1-201ENST00000622881 1040 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AL691447.3-201ENST00000635020 330 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC106858.1-201ENST00000637497 429 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 AC013437.2-201ENST00000639587 677 ntBASIC1.42□□□□□ -2.18
UPK3BQ9BT76 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UPK3BQ9BT76 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 RNU6-462P-201ENST00000362659 105 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 RNU6-1280P-201ENST00000365211 107 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 MIR504-201ENST00000385065 83 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 SNORA40.4-201ENST00000390971 128 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 RNU6-1000P-201ENST00000391066 106 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 SUMO2P12-201ENST00000405924 140 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 RN7SKP266-201ENST00000410232 287 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 RNU6-1140P-201ENST00000410517 106 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 EDDM3CP-201ENST00000415977 425 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC025033.1-201ENST00000463883 194 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC104629.1-201ENST00000494226 508 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 SNORA25.11-201ENST00000515935 105 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms