Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AL592148.1-201ENST00000413568 445 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC114491.1-201ENST00000416095 246 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 ISCA1P6-201ENST00000427740 390 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AL590639.1-201ENST00000456484 337 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 SCARNA24.1-201ENST00000516465 137 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 SNORA18.6-201ENST00000516792 115 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 RNU6-1220P-201ENST00000517126 108 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC090572.1-201ENST00000519251 160 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC079600.2-201ENST00000550076 130 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC078899.3-201ENST00000599065 212 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC064872.1-201ENST00000604823 1072 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC087752.4-201ENST00000605911 462 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AL139286.2-201ENST00000606838 396 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AC103710.2-202ENST00000641454 2853 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC026241.1-201ENST00000517873 2142 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 Y_RNA.77-201ENST00000362962 107 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 OSTCP8-201ENST00000445117 448 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC003071.1-201ENST00000451219 789 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC108078.2-201ENST00000510750 236 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 RNU6-1183P-201ENST00000517054 60 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 SCARNA11.3-201ENST00000517276 130 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC025755.1-201ENST00000521306 278 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AL157871.3-201ENST00000557231 293 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC007151.1-201ENST00000572774 483 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 MIR4319-201ENST00000577285 85 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 MTCO3P13-201ENST00000577757 781 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC006023.1-201ENST00000603944 259 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 AC109347.2-201ENST00000610220 349 ntBASIC3.13□□□□□ -1.91
SDF4Q9BRK5 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 RNU6-641P-201ENST00000384006 107 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 SNORA24.1-201ENST00000384401 135 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 RNA5SP184-201ENST00000411071 108 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 RNU6-195P-201ENST00000411352 109 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 USP9YP6-201ENST00000413550 854 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AC063976.3-201ENST00000426849 329 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 RPL21P2-201ENST00000440049 481 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 MRPL50P4-201ENST00000446432 475 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 FABP5P13-201ENST00000452144 328 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AC126389.1-201ENST00000477436 290 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AC006199.1-201ENST00000548728 219 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 ADI1P3-201ENST00000549509 470 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AL391813.1-201ENST00000603098 260 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AC245014.2-201ENST00000603689 287 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AC246785.4-201ENST00000605374 287 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AL161734.1-201ENST00000609720 557 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AL589743.7-201ENST00000612637 233 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AC012409.4-201ENST00000612923 249 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AC138649.3-201ENST00000622154 254 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 CR381653.2-201ENST00000624041 768 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 LRRC77P-213ENST00000637727 880 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 ADAM3A-203ENST00000461344 2157 ntBASIC3.12□□□□□ -1.91
SDF4Q9BRK5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.12□□□□□ -1.91
SDF4Q9BRK5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SDF4Q9BRK5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SDF4Q9BRK5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SDF4Q9BRK5 Y_RNA.33-201ENST00000362591 102 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 U8.9-201ENST00000365667 134 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 Y_RNA.500-201ENST00000384466 111 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms