Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SNORA31.6-201ENST00000516241 130 ntBASIC2.54□□□□□ -2
SSX3Q99909 RNU6-1315P-201ENST00000517187 99 ntBASIC2.54□□□□□ -2
SSX3Q99909 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.54□□□□□ -2
SSX3Q99909 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.54□□□□□ -2
SSX3Q99909 AP000873.5-201ENST00000533906 236 ntBASIC2.54□□□□□ -2
SSX3Q99909 ADI1P3-201ENST00000549509 470 ntBASIC2.54□□□□□ -2
SSX3Q99909 AC007151.1-201ENST00000572774 483 ntBASIC2.54□□□□□ -2
SSX3Q99909 UBL5P2-201ENST00000583788 219 ntBASIC2.54□□□□□ -2
SSX3Q99909 MIR3616-201ENST00000584070 92 ntBASIC2.54□□□□□ -2
SSX3Q99909 AC005261.5-201ENST00000596280 355 ntBASIC2.54□□□□□ -2
SSX3Q99909 AC245014.2-201ENST00000603689 287 ntBASIC2.54□□□□□ -2
SSX3Q99909 ATP1B3P1-201ENST00000605365 821 ntBASIC2.54□□□□□ -2
SSX3Q99909 AC246785.4-201ENST00000605374 287 ntBASIC2.54□□□□□ -2
SSX3Q99909 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SSX3Q99909 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.54□□□□□ -2
SSX3Q99909 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
SSX3Q99909 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SSX3Q99909 MAPK10-266ENST00000641066 6555 ntBASIC2.54□□□□□ -2
SSX3Q99909 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SSX3Q99909 MTND4P27-201ENST00000450813 1354 ntBASIC2.53□□□□□ -2
SSX3Q99909 SNORA24.1-201ENST00000384401 135 ntBASIC2.53□□□□□ -2
SSX3Q99909 MIR218-1-201ENST00000384999 110 ntBASIC2.53□□□□□ -2
SSX3Q99909 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.53□□□□□ -2
SSX3Q99909 AC096664.2-201ENST00000411843 406 ntBASIC2.53□□□□□ -2
SSX3Q99909 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.53□□□□□ -2
SSX3Q99909 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.53□□□□□ -2
SSX3Q99909 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.53□□□□□ -2
SSX3Q99909 MTND3P17-201ENST00000416968 344 ntBASIC2.53□□□□□ -2
SSX3Q99909 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.53□□□□□ -2
SSX3Q99909 MTCO3P30-201ENST00000426425 670 ntBASIC2.53□□□□□ -2
SSX3Q99909 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.53□□□□□ -2
SSX3Q99909 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.53□□□□□ -2
SSX3Q99909 BRK1P2-201ENST00000442875 223 ntBASIC2.53□□□□□ -2
SSX3Q99909 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.53□□□□□ -2
SSX3Q99909 AC027673.1-201ENST00000456245 405 ntBASIC2.53□□□□□ -2
SSX3Q99909 TRBV1-201ENST00000476502 284 ntBASIC2.53□□□□□ -2
SSX3Q99909 AC004924.1-201ENST00000480160 781 ntBASIC2.53□□□□□ -2
SSX3Q99909 ARL2BPP4-201ENST00000506854 471 ntBASIC2.53□□□□□ -2
SSX3Q99909 AC023141.11-201ENST00000508864 202 ntBASIC2.53□□□□□ -2
SSX3Q99909 RN7SKP272-201ENST00000516988 232 ntBASIC2.53□□□□□ -2
SSX3Q99909 RNU6-410P-201ENST00000517006 107 ntBASIC2.53□□□□□ -2
SSX3Q99909 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.53□□□□□ -2
SSX3Q99909 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.53□□□□□ -2
SSX3Q99909 AC090572.1-201ENST00000519251 160 ntBASIC2.53□□□□□ -2
SSX3Q99909 AC025755.1-201ENST00000521306 278 ntBASIC2.53□□□□□ -2
SSX3Q99909 AP002404.1-201ENST00000532005 451 ntBASIC2.53□□□□□ -2
SSX3Q99909 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.53□□□□□ -2
SSX3Q99909 ELOCP31-201ENST00000540463 467 ntBASIC2.53□□□□□ -2
SSX3Q99909 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.53□□□□□ -2
SSX3Q99909 AC009163.5-201ENST00000575421 637 ntBASIC2.53□□□□□ -2
SSX3Q99909 MIR3199-1-201ENST00000582434 88 ntBASIC2.53□□□□□ -2
SSX3Q99909 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.53□□□□□ -2
SSX3Q99909 AC119751.7-201ENST00000600494 245 ntBASIC2.53□□□□□ -2
SSX3Q99909 AL139286.2-201ENST00000606838 396 ntBASIC2.53□□□□□ -2
SSX3Q99909 AC012409.4-201ENST00000612923 249 ntBASIC2.53□□□□□ -2
SSX3Q99909 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.53□□□□□ -2
SSX3Q99909 AL365361.1-201ENST00000566942 3481 ntBASIC2.53□□□□□ -2
SSX3Q99909 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.53□□□□□ -2
SSX3Q99909 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSX3Q99909 RNA5SP393-201ENST00000363423 117 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SSX3Q99909 SNORD116-9-201ENST00000384000 95 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 SNORA7.4-201ENST00000384249 137 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 SNORD116-3-201ENST00000384287 95 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 SNORD116-7-201ENST00000384404 95 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 SNORD116-5-201ENST00000384462 95 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 RNU6-220P-201ENST00000390919 107 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SSX3Q99909 RNU6-1025P-201ENST00000410629 104 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.52□□□□□ -2.01
SSX3Q99909 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.52□□□□□ -2.01
SSX3Q99909 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.52□□□□□ -2.01
SSX3Q99909 AC079781.2-201ENST00000446424 169 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.52□□□□□ -2.01
SSX3Q99909 AP000705.1-201ENST00000454567 350 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AP000852.1-201ENST00000472460 573 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AP004217.1-201ENST00000480579 346 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 GZMAP1-201ENST00000503054 631 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
SSX3Q99909 AC010424.1-201ENST00000506336 297 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.52□□□□□ -2.01
SSX3Q99909 RNU6-572P-201ENST00000516724 80 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AC009902.1-201ENST00000519351 183 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.52□□□□□ -2.01
SSX3Q99909 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.52□□□□□ -2.01
SSX3Q99909 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.52□□□□□ -2.01
SSX3Q99909 AL157871.3-201ENST00000557231 293 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AC021739.1-201ENST00000559631 174 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AC023824.2-201ENST00000566185 400 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.52□□□□□ -2.01
SSX3Q99909 MIR4782-201ENST00000577987 79 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 MIR1273C-201ENST00000578669 77 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.52□□□□□ -2.01
SSX3Q99909 AC098848.2-201ENST00000588023 330 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.52□□□□□ -2.01
SSX3Q99909 AL451007.1-201ENST00000595491 289 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AL121992.2-201ENST00000606262 256 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AC135507.2-201ENST00000612443 309 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 AC072046.2-201ENST00000618366 268 ntBASIC2.52□□□□□ -2.01
SSX3Q99909 MIR622-201ENST00000638396 96 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms