Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.78□□□□□ -1.96
CPNE1Q99829 AC009414.1-201ENST00000427200 443 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.78□□□□□ -1.96
CPNE1Q99829 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.78□□□□□ -1.96
CPNE1Q99829 CALM2P2-201ENST00000428512 440 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.78□□□□□ -1.96
CPNE1Q99829 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.78□□□□□ -1.96
CPNE1Q99829 WASF1P1-201ENST00000447560 1131 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AC003071.1-201ENST00000451219 789 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.78□□□□□ -1.96
CPNE1Q99829 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.78□□□□□ -1.96
CPNE1Q99829 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.78□□□□□ -1.96
CPNE1Q99829 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.78□□□□□ -1.96
CPNE1Q99829 MTCO3P7-201ENST00000510008 774 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AC091826.1-201ENST00000514065 313 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AC009902.1-201ENST00000519351 183 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.78□□□□□ -1.96
CPNE1Q99829 AP003392.2-201ENST00000527269 208 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 OR4R1P-201ENST00000529879 463 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 RANP3-201ENST00000530970 276 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.78□□□□□ -1.96
CPNE1Q99829 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.78□□□□□ -1.96
CPNE1Q99829 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.78□□□□□ -1.96
CPNE1Q99829 MTCYBP33-201ENST00000575007 1130 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 MTND1P15-201ENST00000579262 949 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.78□□□□□ -1.96
CPNE1Q99829 AC008521.1-201ENST00000587471 187 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.78□□□□□ -1.96
CPNE1Q99829 AC008739.2-201ENST00000597006 317 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AC091805.2-201ENST00000603848 235 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 AC007938.3-201ENST00000604965 623 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.78□□□□□ -1.96
CPNE1Q99829 AC002064.3-201ENST00000623448 346 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 U6.114-201ENST00000636407 96 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 U6.99-201ENST00000637524 83 ntBASIC2.78□□□□□ -1.96
CPNE1Q99829 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.78□□□□□ -1.96
CPNE1Q99829 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
CPNE1Q99829 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
CPNE1Q99829 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.77□□□□□ -1.97
CPNE1Q99829 MTND5P1-201ENST00000445440 1375 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.77□□□□□ -1.97
CPNE1Q99829 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.77□□□□□ -1.97
CPNE1Q99829 Y_RNA.296-201ENST00000364930 108 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CPNE1Q99829 MIR670-201ENST00000390142 98 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AL138885.1-201ENST00000405921 675 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 GSTA9P-201ENST00000406231 611 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 RNU6-1025P-201ENST00000410629 104 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 RNU2-16P-201ENST00000410712 136 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 ATG3P1-201ENST00000419507 911 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AL160275.3-201ENST00000423876 471 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.77□□□□□ -1.97
CPNE1Q99829 MRPL50P4-201ENST00000446432 475 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AL358232.1-201ENST00000448030 501 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 RPS27AP9-201ENST00000477681 438 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.77□□□□□ -1.97
CPNE1Q99829 RBBP4P6-201ENST00000508098 202 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.77□□□□□ -1.97
CPNE1Q99829 AC091133.4-201ENST00000511142 308 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AC025755.1-201ENST00000521306 278 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 OR5AL2P-201ENST00000532185 920 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 ELOCP31-201ENST00000540463 467 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.77□□□□□ -1.97
CPNE1Q99829 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.77□□□□□ -1.97
CPNE1Q99829 RPL23AP78-201ENST00000599928 470 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AC024153.1-201ENST00000603103 365 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AL355877.2-201ENST00000603670 358 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AC024220.1-201ENST00000603675 484 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AL022154.1-201ENST00000604698 785 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AC104073.3-201ENST00000610942 955 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AP001486.3-201ENST00000615334 372 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 UCA1.1-201ENST00000620952 75 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 AC024940.5-201ENST00000622889 474 ntBASIC2.77□□□□□ -1.97
CPNE1Q99829 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CPNE1Q99829 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CPNE1Q99829 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CPNE1Q99829 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CPNE1Q99829 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.76□□□□□ -1.97
CPNE1Q99829 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.76□□□□□ -1.97
CPNE1Q99829 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.76□□□□□ -1.97
CPNE1Q99829 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CPNE1Q99829 ZNF519P1-201ENST00000449011 1626 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CPNE1Q99829 SNORA62.1-201ENST00000364287 154 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 SNORD115-7-201ENST00000365306 82 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 RNU4-48P-201ENST00000365559 182 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 OR5H15-201ENST00000383696 930 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 Y_RNA.436-201ENST00000384097 102 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 RNU6-1103P-201ENST00000384150 107 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 Y_RNA.576-201ENST00000384781 102 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 MIR592-201ENST00000384959 97 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 RNU2-49P-201ENST00000410666 184 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 USP9YP6-201ENST00000413550 854 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 AL139281.1-201ENST00000422120 335 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CPNE1Q99829 AL358075.3-201ENST00000426289 226 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.76□□□□□ -1.97
CPNE1Q99829 AC073464.1-201ENST00000429823 534 ntBASIC2.76□□□□□ -1.97
CPNE1Q99829 RPL23AP58-201ENST00000440453 469 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms