Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 HSPE1P1-201ENST00000421494 318 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS1Q99742 AL360271.2-201ENST00000447710 161 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 MTND5P20-201ENST00000448677 143 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 RPL37P4-201ENST00000448908 268 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 AL583843.1-201ENST00000456070 346 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 DYNLL1P5-201ENST00000467158 270 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 RPL21P93-201ENST00000480465 489 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 AC022493.1-201ENST00000492984 337 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 RNU1-103P-201ENST00000516502 125 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 Y_RNA.702-201ENST00000516843 96 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 SNORA31.19-201ENST00000517079 126 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 RNU6-1314P-201ENST00000517139 104 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 AC026403.1-201ENST00000518938 295 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.24□□□□□ -1.89
NPAS1Q99742 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS1Q99742 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.24□□□□□ -1.89
NPAS1Q99742 HIGD1AP1-201ENST00000550979 275 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 OR11H5P-201ENST00000554039 926 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.24□□□□□ -1.89
NPAS1Q99742 MIR4782-201ENST00000577987 79 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 MIR3941-201ENST00000582572 103 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 AL355598.1-201ENST00000604169 202 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS1Q99742 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPAS1Q99742 AL031601.2-202ENST00000622650 282 ntBASIC3.24□□□□□ -1.89
NPAS1Q99742 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NPAS1Q99742 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.24□□□□□ -1.89
NPAS1Q99742 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS1Q99742 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
NPAS1Q99742 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS1Q99742 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
NPAS1Q99742 AC118273.1-201ENST00000525324 3006 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NPAS1Q99742 RNU6-1252P-201ENST00000363054 104 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 SNORA62.3-201ENST00000365110 153 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 RNU6-510P-201ENST00000391239 108 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 RNA5SP38-201ENST00000410750 119 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.23□□□□□ -1.89
NPAS1Q99742 AL353729.1-201ENST00000425044 720 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 RPL26P9-201ENST00000457466 433 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 AC106707.2-201ENST00000484182 374 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 AC092185.1-201ENST00000491371 97 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.23□□□□□ -1.89
NPAS1Q99742 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.23□□□□□ -1.89
NPAS1Q99742 AC079140.5-201ENST00000507882 310 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 AC010265.1-201ENST00000513509 211 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NPAS1Q99742 RN7SKP18-201ENST00000516005 275 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 SNORA19.2-201ENST00000516013 114 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 Y_RNA.665-201ENST00000516177 98 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.23□□□□□ -1.89
NPAS1Q99742 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 TRAV37-201ENST00000553906 342 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 AC005668.1-201ENST00000571142 476 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 MIR4429-201ENST00000580105 73 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 AC073539.2-201ENST00000597113 165 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 SNORA51-201ENST00000606420 132 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 AL357078.3-201ENST00000607528 618 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 AL121757.2-201ENST00000611223 313 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.23□□□□□ -1.89
NPAS1Q99742 AL732372.2-225ENST00000642124 456 ntBASIC3.23□□□□□ -1.89
NPAS1Q99742 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NPAS1Q99742 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NPAS1Q99742 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NPAS1Q99742 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NPAS1Q99742 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS1Q99742 MTND5P27-201ENST00000428871 1720 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS1Q99742 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS1Q99742 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS1Q99742 RNU6-1303P-201ENST00000364841 107 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 RNU5E-4P-201ENST00000364931 120 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 Y_RNA.399-201ENST00000383955 105 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 Y_RNA.480-201ENST00000384364 102 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 Y_RNA.530-201ENST00000384587 101 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 EIF4E2P1-201ENST00000393781 255 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 PGBD4P6-201ENST00000421501 610 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.22□□□□□ -1.89
NPAS1Q99742 AC073063.1-201ENST00000434352 607 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 AL078601.1-201ENST00000444542 271 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 RN7SL442P-201ENST00000473804 320 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 MTCO2P30-201ENST00000503662 364 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 AC046134.1-201ENST00000514454 666 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 MIR892C-201ENST00000516410 77 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 RNU6-273P-201ENST00000516937 96 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 RN7SKP256-201ENST00000517201 314 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 AC069113.1-201ENST00000517763 267 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.22□□□□□ -1.89
NPAS1Q99742 AP006245.1-201ENST00000522549 120 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS1Q99742 PSMA3P-201ENST00000555485 635 ntBASIC3.22□□□□□ -1.89
NPAS1Q99742 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.22□□□□□ -1.89
NPAS1Q99742 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.22□□□□□ -1.89
NPAS1Q99742 NUTF2P8-201ENST00000604593 363 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms