Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AL161431.1-201ENST00000618966 4205 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.36□□□□□ -1.87
MEIS3Q99687 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.36□□□□□ -1.87
MEIS3Q99687 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MEIS3Q99687 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.35□□□□□ -1.87
MEIS3Q99687 AC011460.1-201ENST00000636268 1834 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MEIS3Q99687 RNU6-1097P-201ENST00000363586 107 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 Y_RNA.166-201ENST00000363730 102 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 Y_RNA.216-201ENST00000364205 93 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 Y_RNA.474-201ENST00000384341 102 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 RNU6-692P-201ENST00000384496 107 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 AL512633.1-201ENST00000399931 655 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 MIR1302-11-201ENST00000408051 138 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 MIR1302-9-201ENST00000408365 138 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 MIR1302-10-201ENST00000408734 138 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 RNU2-15P-201ENST00000410692 191 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.35□□□□□ -1.87
MEIS3Q99687 MTND2P23-201ENST00000422990 651 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 MTCO3P46-201ENST00000425787 232 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.35□□□□□ -1.87
MEIS3Q99687 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.35□□□□□ -1.87
MEIS3Q99687 IFNA20P-201ENST00000436840 528 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 MTCYBP6-201ENST00000441810 138 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 HMGN2P26-201ENST00000463169 339 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 AL049714.1-201ENST00000466686 347 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 HMGB1P25-201ENST00000468402 607 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.35□□□□□ -1.87
MEIS3Q99687 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.35□□□□□ -1.87
MEIS3Q99687 AC092436.1-201ENST00000506450 503 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.35□□□□□ -1.87
MEIS3Q99687 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.35□□□□□ -1.87
MEIS3Q99687 RNA5SP76-201ENST00000516277 87 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 RNU6-798P-201ENST00000516912 103 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 RNU6-410P-201ENST00000517006 107 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.35□□□□□ -1.87
MEIS3Q99687 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.35□□□□□ -1.87
MEIS3Q99687 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.35□□□□□ -1.87
MEIS3Q99687 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.35□□□□□ -1.87
MEIS3Q99687 MIR4635-201ENST00000583759 79 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 AC004853.1-201ENST00000604902 698 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 MIR1302-2-201ENST00000607096 138 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 Y_RNA.812-201ENST00000610788 101 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 Y_RNA.784-201ENST00000613803 101 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 AC093913.1-201ENST00000614178 329 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 AL590099.1-201ENST00000615276 138 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 Y_RNA.787-201ENST00000616522 101 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 Y_RNA.780-201ENST00000617336 101 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
MEIS3Q99687 AL596245.1-201ENST00000618994 362 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 Y_RNA.801-201ENST00000619005 101 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 AC002550.2-201ENST00000621246 394 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.35□□□□□ -1.87
MEIS3Q99687 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
MEIS3Q99687 AC108206.1-201ENST00000570186 4159 ntBASIC3.35□□□□□ -1.87
MEIS3Q99687 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MEIS3Q99687 SNORA62.1-201ENST00000364287 154 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
MEIS3Q99687 SNORA75.4-201ENST00000391278 119 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 RN7SKP32-201ENST00000410167 303 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 RNA5SP129-201ENST00000410276 118 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 MTND3P8-201ENST00000412909 339 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 BMS1P22-201ENST00000414726 313 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 RPS15AP40-201ENST00000419621 391 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 RPL7L1P10-201ENST00000427790 463 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 AC093106.2-201ENST00000428212 385 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 SRIP2-201ENST00000428470 166 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 AC008065.1-201ENST00000428525 348 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.34□□□□□ -1.87
MEIS3Q99687 MTND1P18-201ENST00000448191 573 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 AL353691.1-201ENST00000451332 387 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 AL590639.1-201ENST00000456484 337 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 MRPS17P3-201ENST00000465453 385 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 MTCO3P44-201ENST00000510977 541 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 SNORD60.2-201ENST00000516883 86 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 IGKV2D-36-201ENST00000518643 226 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 HMGB1P41-201ENST00000520234 440 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 AL121821.2-201ENST00000556081 394 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.34□□□□□ -1.87
MEIS3Q99687 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.34□□□□□ -1.87
MEIS3Q99687 MIR5583-1-201ENST00000580941 59 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.34□□□□□ -1.87
MEIS3Q99687 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.34□□□□□ -1.87
MEIS3Q99687 KC877982.1-201ENST00000602313 470 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 uc_338.5-201ENST00000611839 155 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 uc_338.12-201ENST00000616344 181 ntBASIC3.34□□□□□ -1.87
MEIS3Q99687 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.34□□□□□ -1.88
MEIS3Q99687 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
MEIS3Q99687 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
MEIS3Q99687 AC009902.3-201ENST00000606235 2172 ntBASIC3.34□□□□□ -1.88
MEIS3Q99687 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MEIS3Q99687 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.33□□□□□ -1.88
MEIS3Q99687 AC244517.1-201ENST00000606030 2086 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
MEIS3Q99687 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.33□□□□□ -1.88
MEIS3Q99687 SNORA5B-201ENST00000363786 132 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 SNORA51.2-201ENST00000364595 132 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 Y_RNA.373-201ENST00000365600 103 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 MIR34A-201ENST00000385130 110 ntBASIC3.33□□□□□ -1.88
MEIS3Q99687 TXNP7-201ENST00000406296 293 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms