Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MTND5P14-201ENST00000441481 1267 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 RNU7-157P-201ENST00000459600 66 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 SETP11-201ENST00000473027 690 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 AC139453.3-201ENST00000493276 369 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 EIF4EP3-201ENST00000498782 656 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 MIR4713-201ENST00000582691 75 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 AC104763.3-201ENST00000613765 618 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
SPENQ96T58 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SPENQ96T58 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 RPL31P20-201ENST00000449593 360 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 AC110792.3-201ENST00000595906 1614 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 AP000776.1-201ENST00000530032 1663 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SPENQ96T58 AL513343.1-201ENST00000451818 792 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 OR2A41P-201ENST00000473586 105 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 Y_RNA.654-201ENST00000497848 106 ntBASIC0.32□□□□□ -2.36
SPENQ96T58 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.32□□□□□ -2.36
SPENQ96T58 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.32□□□□□ -2.36
SPENQ96T58 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SPENQ96T58 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.31□□□□□ -2.36
SPENQ96T58 RNU1-105P-201ENST00000363470 161 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 MIR618-201ENST00000385287 98 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 BTF3L4P2-201ENST00000392798 346 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 AC004383.1-201ENST00000438135 289 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 RPL23AP3-201ENST00000453844 468 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.31□□□□□ -2.36
SPENQ96T58 AC025594.3-201ENST00000613068 790 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 AC091925.2-201ENST00000625059 256 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
SPENQ96T58 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
SPENQ96T58 RNU1-96P-201ENST00000364163 162 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.31□□□□□ -2.36
SPENQ96T58 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.31□□□□□ -2.36
SPENQ96T58 AC006518.2-201ENST00000542513 940 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 AC093027.1-201ENST00000546698 429 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.31□□□□□ -2.36
SPENQ96T58 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.31□□□□□ -2.36
SPENQ96T58 MIR604-201ENST00000384880 94 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 MIR100-201ENST00000385259 80 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 TMEM167AP1-201ENST00000423409 219 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.31□□□□□ -2.36
SPENQ96T58 MTND4P6-201ENST00000438297 472 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.31□□□□□ -2.36
SPENQ96T58 AP005902.1-201ENST00000521358 186 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 AC025588.4-201ENST00000615802 908 ntBASIC0.31□□□□□ -2.36
SPENQ96T58 SNORA51.6-201ENST00000384151 125 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 Y_RNA.552-201ENST00000384665 112 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 RNU6-733P-201ENST00000410759 104 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.3□□□□□ -2.36
SPENQ96T58 RPL30P11-201ENST00000495304 339 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 HMGB1P14-201ENST00000557424 591 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.3□□□□□ -2.36
SPENQ96T58 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
SPENQ96T58 HSBP1P2-201ENST00000299671 229 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 UBL5P1-201ENST00000507979 193 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 AL590705.4-201ENST00000532209 134 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 AC007834.2-201ENST00000536310 343 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 COX6CP3-201ENST00000580869 223 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 AC025165.5-201ENST00000602802 578 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 AL357075.2-201ENST00000614906 189 ntBASIC0.3□□□□□ -2.36
SPENQ96T58 RNU6-349P-201ENST00000362402 107 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 RNA5SP98-201ENST00000363158 137 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 AC097463.2-201ENST00000421074 142 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 RPL23AP33-201ENST00000442301 452 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.29□□□□□ -2.36
SPENQ96T58 AC012254.4-201ENST00000588843 273 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 AC090132.2-201ENST00000615881 347 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 MIR10B-201ENST00000385011 110 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 RNA5SP105-201ENST00000391123 113 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.29□□□□□ -2.36
SPENQ96T58 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 TRGVB-201ENST00000453257 471 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 AC079140.2-201ENST00000506193 142 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.29□□□□□ -2.36
SPENQ96T58 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.29□□□□□ -2.36
SPENQ96T58 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.29□□□□□ -2.36
SPENQ96T58 RN7SKP142-201ENST00000411236 328 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.29□□□□□ -2.36
SPENQ96T58 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.29□□□□□ -2.36
SPENQ96T58 TOMM22P2-201ENST00000430735 237 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 AC241584.1-201ENST00000438469 1241 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.29□□□□□ -2.36
SPENQ96T58 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.29□□□□□ -2.36
SPENQ96T58 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.29□□□□□ -2.36
SPENQ96T58 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.29□□□□□ -2.36
SPENQ96T58 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.29□□□□□ -2.36
SPENQ96T58 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SPENQ96T58 CR848007.1-201ENST00000442354 1699 ntBASIC0.29□□□□□ -2.36
SPENQ96T58 MIR101-1-201ENST00000362265 75 ntBASIC0.28□□□□□ -2.36
SPENQ96T58 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.28□□□□□ -2.36
SPENQ96T58 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.28□□□□□ -2.36
SPENQ96T58 RNA5SP404-201ENST00000517118 132 ntBASIC0.28□□□□□ -2.36
SPENQ96T58 RNU2-19P-201ENST00000517288 84 ntBASIC0.28□□□□□ -2.36
SPENQ96T58 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.28□□□□□ -2.36
SPENQ96T58 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
SPENQ96T58 MIR1250-201ENST00000408098 113 ntBASIC0.28□□□□□ -2.36
SPENQ96T58 SFR1P2-201ENST00000421841 730 ntBASIC0.28□□□□□ -2.36
SPENQ96T58 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.28□□□□□ -2.36
SPENQ96T58 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms