Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.28□□□□□ -2.36
CFAP54Q96N23 FAM60BP-201ENST00000578364 658 ntBASIC0.28□□□□□ -2.36
CFAP54Q96N23 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.28□□□□□ -2.36
CFAP54Q96N23 OR2A41P-201ENST00000473586 105 ntBASIC0.28□□□□□ -2.36
CFAP54Q96N23 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.28□□□□□ -2.36
CFAP54Q96N23 AL157398.1-201ENST00000452981 186 ntBASIC0.27□□□□□ -2.37
CFAP54Q96N23 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.27□□□□□ -2.37
CFAP54Q96N23 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.27□□□□□ -2.37
CFAP54Q96N23 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.27□□□□□ -2.37
CFAP54Q96N23 DUXAP10-204ENST00000612052 616 ntBASIC0.27□□□□□ -2.37
CFAP54Q96N23 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.27□□□□□ -2.37
CFAP54Q96N23 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CFAP54Q96N23 RPL37P10-201ENST00000412884 288 ntBASIC0.27□□□□□ -2.37
CFAP54Q96N23 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.27□□□□□ -2.37
CFAP54Q96N23 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
CFAP54Q96N23 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.27□□□□□ -2.37
CFAP54Q96N23 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.27□□□□□ -2.37
CFAP54Q96N23 AP001350.1-201ENST00000601906 1524 ntBASIC0.27□□□□□ -2.37
CFAP54Q96N23 HMGB1P17-201ENST00000403495 628 ntBASIC0.27□□□□□ -2.37
CFAP54Q96N23 AC025165.5-201ENST00000602802 578 ntBASIC0.27□□□□□ -2.37
CFAP54Q96N23 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CFAP54Q96N23 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CFAP54Q96N23 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 PIGPP2-201ENST00000411569 458 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.26□□□□□ -2.37
CFAP54Q96N23 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.26□□□□□ -2.37
CFAP54Q96N23 COL6A4P2-205ENST00000509855 506 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 Y_RNA.659-201ENST00000515994 113 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 AC006518.2-201ENST00000542513 940 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.26□□□□□ -2.37
CFAP54Q96N23 U4.2-201ENST00000618561 85 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 MTCO3P4-201ENST00000419236 787 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 MTATP6P7-201ENST00000453315 681 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 MIR4645-201ENST00000583158 77 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 AC002545.1-201ENST00000592511 181 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 AC243960.4-201ENST00000600532 288 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 AC025594.3-201ENST00000613068 790 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 MIR6076-201ENST00000617521 113 ntBASIC0.26□□□□□ -2.37
CFAP54Q96N23 MIR100-201ENST00000385259 80 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.25□□□□□ -2.37
CFAP54Q96N23 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.25□□□□□ -2.37
CFAP54Q96N23 AC136628.3-201ENST00000521868 290 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 AC090115.3-201ENST00000553218 849 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.25□□□□□ -2.37
CFAP54Q96N23 AC012676.2-201ENST00000619258 186 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 AC087821.2-201ENST00000637086 450 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 MIR214-201ENST00000385214 110 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 MIR607-201ENST00000385241 96 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 RNU6-920P-201ENST00000410926 92 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 RPS3AP37-201ENST00000419176 745 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 RPL7P29-201ENST00000437151 728 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.25□□□□□ -2.37
CFAP54Q96N23 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
CFAP54Q96N23 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.24□□□□□ -2.37
CFAP54Q96N23 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.24□□□□□ -2.37
CFAP54Q96N23 AC108120.2-201ENST00000512973 294 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 MIR548AX-201ENST00000580117 73 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 AC106791.2-201ENST00000604680 391 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 SNORD114-31-201ENST00000363219 75 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 RNA5SP118-201ENST00000410385 109 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.24□□□□□ -2.37
CFAP54Q96N23 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.24□□□□□ -2.37
CFAP54Q96N23 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.24□□□□□ -2.37
CFAP54Q96N23 AC133963.2-201ENST00000513686 578 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.24□□□□□ -2.37
CFAP54Q96N23 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.24□□□□□ -2.37
CFAP54Q96N23 MIR3198-2-201ENST00000577868 80 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 AC090666.1-201ENST00000578241 445 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.24□□□□□ -2.37
CFAP54Q96N23 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CFAP54Q96N23 Y_RNA.413-201ENST00000384007 102 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 SNORA8-201ENST00000384574 139 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 VPS26BP1-201ENST00000417155 755 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 NF1P3-201ENST00000457709 450 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 Y_RNA.754-201ENST00000476024 102 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 OR5H4P-201ENST00000510851 923 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 PSMC1P5-201ENST00000512850 177 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 Y_RNA.790-201ENST00000614282 102 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 Y_RNA.782-201ENST00000614695 102 ntBASIC0.24□□□□□ -2.37
CFAP54Q96N23 U3.8-201ENST00000363675 217 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 RNU6-1184P-201ENST00000384588 108 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 RNU4-65P-201ENST00000410473 140 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 AC023141.4-201ENST00000412031 328 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 TPTE2P6-202ENST00000445572 1007 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 AC112206.3-201ENST00000514578 389 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.23□□□□□ -2.37
CFAP54Q96N23 RNU6-600P-201ENST00000362524 99 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 RPS4XP3-201ENST00000398541 413 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 MTCO3P35-201ENST00000485582 781 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 SNORA44.1-201ENST00000517031 108 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.23□□□□□ -2.37
CFAP54Q96N23 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.23□□□□□ -2.37
CFAP54Q96N23 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.23□□□□□ -2.37
CFAP54Q96N23 HMGB1P14-201ENST00000557424 591 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 LINC02211-204ENST00000642024 1070 ntBASIC0.23□□□□□ -2.37
CFAP54Q96N23 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.23□□□□□ -2.37
CFAP54Q96N23 SNORA51.10-201ENST00000384418 136 ntBASIC0.22□□□□□ -2.37
CFAP54Q96N23 AL035410.1-201ENST00000427409 427 ntBASIC0.22□□□□□ -2.37
CFAP54Q96N23 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.22□□□□□ -2.37
CFAP54Q96N23 AC105914.1-201ENST00000511798 226 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms