Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC124916.1-201ENST00000444020 547 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.28□□□□□ -2.04
USP47Q96K76 PPP1R2P5-201ENST00000457256 603 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USP47Q96K76 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.28□□□□□ -2.04
USP47Q96K76 RNA5SP290-201ENST00000517133 127 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.28□□□□□ -2.04
USP47Q96K76 ANP32BP3-201ENST00000559213 706 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.28□□□□□ -2.04
USP47Q96K76 AP000403.1-201ENST00000603349 851 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 OR10AB1P-201ENST00000609613 938 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 AL512598.1-201ENST00000610158 273 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 AC006386.1-201ENST00000619436 415 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP47Q96K76 Y_RNA.116-201ENST00000363292 103 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
USP47Q96K76 RNU1-57P-201ENST00000384491 166 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USP47Q96K76 MIR1323-201ENST00000408090 73 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 MTCO1P17-201ENST00000411522 491 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.27□□□□□ -2.05
USP47Q96K76 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.27□□□□□ -2.05
USP47Q96K76 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.27□□□□□ -2.05
USP47Q96K76 AC010631.1-201ENST00000474150 156 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.27□□□□□ -2.05
USP47Q96K76 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.27□□□□□ -2.05
USP47Q96K76 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.27□□□□□ -2.05
USP47Q96K76 AC084851.1-201ENST00000529105 249 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USP47Q96K76 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
USP47Q96K76 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.27□□□□□ -2.05
USP47Q96K76 UBE2L4-201ENST00000587688 464 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 AC004805.2-201ENST00000605382 482 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 MIR6895-201ENST00000613497 78 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.27□□□□□ -2.05
USP47Q96K76 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.27□□□□□ -2.05
USP47Q96K76 PCMTD1P7-201ENST00000634506 357 ntBASIC2.27□□□□□ -2.05
USP47Q96K76 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USP47Q96K76 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
USP47Q96K76 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USP47Q96K76 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.26□□□□□ -2.05
USP47Q96K76 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.26□□□□□ -2.05
USP47Q96K76 MIR518E-201ENST00000385252 88 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 RNU6-750P-201ENST00000390946 107 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 CCNG1P1-201ENST00000406783 885 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 RNU6-1328P-201ENST00000410938 106 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 HMGB1P49-201ENST00000418882 569 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 BPY2DP-201ENST00000422208 265 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 USP12PX-201ENST00000432383 1057 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 SNRPEP9-201ENST00000436794 238 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.26□□□□□ -2.05
USP47Q96K76 AP000542.1-201ENST00000448473 371 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 CECR9-201ENST00000453421 199 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 snoU109.3-201ENST00000459477 145 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.26□□□□□ -2.05
USP47Q96K76 AC110760.3-202ENST00000515177 371 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 RNU1-104P-201ENST00000517280 175 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.26□□□□□ -2.05
USP47Q96K76 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.26□□□□□ -2.05
USP47Q96K76 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.26□□□□□ -2.05
USP47Q96K76 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.26□□□□□ -2.05
USP47Q96K76 MIR4658-201ENST00000584344 65 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 BX248123.2-201ENST00000606318 124 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.26□□□□□ -2.05
USP47Q96K76 AC112204.3-201ENST00000623822 332 ntBASIC2.26□□□□□ -2.05
USP47Q96K76 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.26□□□□□ -2.05
USP47Q96K76 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USP47Q96K76 Y_RNA.245-201ENST00000364493 95 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 RPL21P24-201ENST00000413752 448 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 MTATP6P19-201ENST00000413797 659 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.25□□□□□ -2.05
USP47Q96K76 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.25□□□□□ -2.05
USP47Q96K76 AC083875.1-201ENST00000419509 405 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.25□□□□□ -2.05
USP47Q96K76 MED14P1-201ENST00000430517 648 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 AC010153.1-201ENST00000432862 727 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.25□□□□□ -2.05
USP47Q96K76 HMGB1P31-201ENST00000437242 427 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.25□□□□□ -2.05
USP47Q96K76 MTATP6P30-201ENST00000443540 664 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.25□□□□□ -2.05
USP47Q96K76 EXOSC3P1-201ENST00000448649 500 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.25□□□□□ -2.05
USP47Q96K76 MTATP6P14-201ENST00000455189 673 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 AC093281.2-201ENST00000510153 597 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 MTND5P13-201ENST00000513046 1079 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.25□□□□□ -2.05
USP47Q96K76 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.25□□□□□ -2.05
USP47Q96K76 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.25□□□□□ -2.05
USP47Q96K76 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.25□□□□□ -2.05
USP47Q96K76 AL596327.1-201ENST00000603629 213 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.25□□□□□ -2.05
USP47Q96K76 AC009269.6-201ENST00000621778 588 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.25□□□□□ -2.05
USP47Q96K76 AC099786.3-201ENST00000565735 1410 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.25□□□□□ -2.05
USP47Q96K76 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USP47Q96K76 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms