Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 RNA5SP229-201ENST00000410809 99 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 RNA5SP120-201ENST00000410900 112 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 ARL5AP1-201ENST00000418991 388 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AL158156.1-201ENST00000422509 473 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AL353729.1-201ENST00000425044 720 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC236972.2-201ENST00000434979 310 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC090774.1-201ENST00000435925 246 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC125238.1-201ENST00000448842 249 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 SCARNA18-201ENST00000459004 134 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 RPL21P8-201ENST00000465083 535 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC098591.2-201ENST00000510152 315 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 APOOP4-201ENST00000513530 597 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 RNU6-123P-201ENST00000516163 102 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 BNIP3P22-201ENST00000593399 556 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 XIAPP1-201ENST00000603162 600 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC092747.3-201ENST00000603769 301 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AC008162.1-201ENST00000604718 254 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AL670379.4-201ENST00000605279 254 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AL158032.1-201ENST00000605401 106 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 MIR7112-201ENST00000616126 65 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 MIR6130-201ENST00000619419 109 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AL359757.2-201ENST00000624309 274 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 U6.98-201ENST00000637157 84 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 AP001350.1-201ENST00000601906 1524 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PGBD1Q96JS3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.79□□□□□ -1.8
PGBD1Q96JS3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 RNU6-356P-201ENST00000384140 107 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 RNU6-692P-201ENST00000384496 107 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 Y_RNA.579-201ENST00000390939 94 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AL592114.1-201ENST00000403842 483 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 USP9YP20-201ENST00000419224 558 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AC245291.1-201ENST00000419501 328 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 RN7SL601P-201ENST00000471221 293 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 RNU6-559P-201ENST00000516151 98 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AC093249.1-201ENST00000567049 203 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 MTCO3P13-201ENST00000577757 781 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AL670379.6-201ENST00000603753 252 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AL670379.11-201ENST00000604059 253 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AL670379.1-201ENST00000604752 252 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AL670379.5-201ENST00000605253 252 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AL670379.12-201ENST00000605291 253 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AL670379.8-201ENST00000605353 252 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AL670379.7-201ENST00000605823 252 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 HMGN2P28-201ENST00000606102 262 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AL022345.1-201ENST00000607292 135 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 AL355596.1-201ENST00000565399 3996 ntBASIC3.78□□□□□ -1.8
PGBD1Q96JS3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PGBD1Q96JS3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 MIR148B-201ENST00000362252 99 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 AC110754.1-201ENST00000399740 601 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 MIR548F5-201ENST00000408421 86 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 RNU2-43P-201ENST00000410306 190 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 RNU4-46P-201ENST00000410818 138 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 POLHP1-201ENST00000411806 470 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 RPS3AP52-201ENST00000435639 297 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 AP000873.1-201ENST00000463987 400 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 VN1R17P-201ENST00000472048 1090 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 RPL7P43-201ENST00000478876 753 ntBASIC3.77□□□□□ -1.81
PGBD1Q96JS3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.77□□□□□ -1.81
PGBD1Q96JS3 AC090136.1-201ENST00000520009 240 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms