Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RNU11-3P-201ENST00000391111 133 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 BTF3L4P3-201ENST00000418879 476 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 AL513185.2-201ENST00000425543 193 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 AL354695.1-201ENST00000427935 228 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.22□□□□□ -2.21
AP3S1Q92572 AC092427.1-201ENST00000439177 601 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.22□□□□□ -2.21
AP3S1Q92572 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.22□□□□□ -2.21
AP3S1Q92572 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.22□□□□□ -2.21
AP3S1Q92572 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.22□□□□□ -2.21
AP3S1Q92572 AC069306.1-201ENST00000507006 843 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 AC117522.2-201ENST00000510049 657 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.22□□□□□ -2.21
AP3S1Q92572 AC005832.3-201ENST00000537929 631 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.22□□□□□ -2.21
AP3S1Q92572 MIR4435-1-201ENST00000582552 80 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 AC073544.2-201ENST00000601155 540 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.22□□□□□ -2.21
AP3S1Q92572 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.22□□□□□ -2.21
AP3S1Q92572 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
AP3S1Q92572 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
AP3S1Q92572 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
AP3S1Q92572 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.21□□□□□ -2.22
AP3S1Q92572 RNU6-661P-201ENST00000362409 107 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 MIR518D-201ENST00000385014 87 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 RNA5SP501-201ENST00000410990 112 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 RNA5SP508-201ENST00000411327 119 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 USP9YP22-201ENST00000438971 294 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 RPS15AP9-201ENST00000439856 381 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.21□□□□□ -2.22
AP3S1Q92572 COX6CP18-201ENST00000448769 222 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 AL590365.1-201ENST00000450788 243 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 AC092001.1-201ENST00000453012 261 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.21□□□□□ -2.22
AP3S1Q92572 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.21□□□□□ -2.22
AP3S1Q92572 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.21□□□□□ -2.22
AP3S1Q92572 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
AP3S1Q92572 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.21□□□□□ -2.22
AP3S1Q92572 AP002906.1-201ENST00000603405 233 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 AC010900.2-201ENST00000604508 210 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 NDUFA8P1-201ENST00000605525 367 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 AP003476.1-201ENST00000623984 516 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 AC138627.2-201ENST00000624202 601 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.21□□□□□ -2.22
AP3S1Q92572 AC019226.1-201ENST00000625666 515 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 MIR1322-201ENST00000638013 71 ntBASIC1.21□□□□□ -2.22
AP3S1Q92572 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
AP3S1Q92572 RNU6-203P-201ENST00000384038 104 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 Y_RNA.510-201ENST00000384511 114 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 RNU6-1300P-201ENST00000391046 108 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 SNORA67.6-201ENST00000391093 99 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 RNU6-932P-201ENST00000391108 106 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 DHFRP6-201ENST00000401776 268 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 RNU2-36P-201ENST00000410361 191 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.2□□□□□ -2.22
AP3S1Q92572 PTENP1-201ENST00000447117 1215 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 ARPC3P5-201ENST00000448802 534 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.2□□□□□ -2.22
AP3S1Q92572 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.2□□□□□ -2.22
AP3S1Q92572 MTND1P9-201ENST00000453775 944 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.2□□□□□ -2.22
AP3S1Q92572 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
AP3S1Q92572 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.2□□□□□ -2.22
AP3S1Q92572 AC011005.2-201ENST00000487324 359 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 AC099513.1-201ENST00000490423 301 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 AC008628.1-201ENST00000508663 265 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 MTND5P13-201ENST00000513046 1079 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 RNU6-581P-201ENST00000516214 105 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 RNU6-551P-201ENST00000516661 103 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.2□□□□□ -2.22
AP3S1Q92572 SNORD53B-201ENST00000577887 78 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 CYP2C61P-201ENST00000604072 290 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 AC009237.15-201ENST00000610252 501 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 AC009268.2-201ENST00000621925 457 ntBASIC1.2□□□□□ -2.22
AP3S1Q92572 SNRPEP3-201ENST00000338402 276 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
AP3S1Q92572 Y_RNA.25-201ENST00000362528 102 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 RNU6-1167P-201ENST00000363227 94 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 RNU6-359P-201ENST00000365466 108 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 RNU6-754P-201ENST00000391166 107 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 RNU1-78P-201ENST00000391248 165 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 MIR1323-201ENST00000408090 73 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 SNORA3.2-201ENST00000408221 125 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 LUZP4P1-201ENST00000415420 344 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.19□□□□□ -2.22
AP3S1Q92572 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.19□□□□□ -2.22
AP3S1Q92572 RNU6-1261P-201ENST00000517194 104 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.19□□□□□ -2.22
AP3S1Q92572 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.19□□□□□ -2.22
AP3S1Q92572 ADAM3B-201ENST00000569937 840 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 MIR4648-201ENST00000580107 72 ntBASIC1.19□□□□□ -2.22
AP3S1Q92572 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.19□□□□□ -2.22
AP3S1Q92572 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.19□□□□□ -2.22
AP3S1Q92572 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.19□□□□□ -2.22
AP3S1Q92572 AL450270.1-201ENST00000606160 391 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms