Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 VN1R17P-201ENST00000472048 1090 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AC117503.1-201ENST00000472241 394 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 HMGN1P11-201ENST00000508668 303 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 RNU6-559P-201ENST00000516151 98 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 COPS8P3-201ENST00000526024 482 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 ATP5F1P5-201ENST00000526403 760 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AP005639.2-201ENST00000527592 928 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 MIR4790-201ENST00000577799 79 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 MIR1302-2-201ENST00000607096 138 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AL138726.1-201ENST00000614873 333 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AL391261.4-201ENST00000616012 481 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RNU6-600P-201ENST00000362524 99 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RN7SKP280-201ENST00000364196 304 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RNA5SP167-201ENST00000365461 116 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 SNORA4.3-201ENST00000365564 137 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 Y_RNA.394-201ENST00000383942 103 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 Y_RNA.480-201ENST00000384364 102 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RNU6-1297P-201ENST00000384415 104 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RNA5SP31-201ENST00000411144 127 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC126124.2-201ENST00000413542 321 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RPL21P90-201ENST00000415692 466 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC073063.1-201ENST00000434352 607 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RPS3AP52-201ENST00000435639 297 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 NOTCH2P1-201ENST00000443481 624 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AL360271.2-201ENST00000447710 161 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 MTND1P17-201ENST00000448961 204 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC006539.3-201ENST00000454258 129 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RN7SL442P-201ENST00000473804 320 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RPL31P60-201ENST00000478450 367 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RPS4XP22-201ENST00000480755 780 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RPL7P47-201ENST00000497299 556 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 MTND5P5-201ENST00000503764 376 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RNU6-143P-201ENST00000516942 93 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC106785.1-201ENST00000565935 262 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 FRG2DP-202ENST00000566967 323 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC138761.3-201ENST00000579993 334 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AC073539.2-201ENST00000597113 165 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AL670379.10-201ENST00000604330 253 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 AL670379.9-201ENST00000605428 253 ntBASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4AQ8WYN0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AC116096.1-201ENST00000566804 2314 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RNA5SP124-201ENST00000362739 110 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 Y_RNA.315-201ENST00000365117 102 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 SNORD116-11-201ENST00000383882 92 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RNU6-741P-201ENST00000383889 107 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RNU6-128P-201ENST00000383976 107 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RNU6-1227P-201ENST00000383981 107 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 MIR578-201ENST00000384828 96 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 MIR301A-201ENST00000385261 86 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AL360182.1-201ENST00000397433 468 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RPL21P17-201ENST00000397467 475 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RN7SKP27-201ENST00000410684 333 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RNU4-14P-201ENST00000410858 122 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RPL37P10-201ENST00000412884 288 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RPL31P12-201ENST00000422587 358 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AL590383.1-201ENST00000428602 75 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 VDAC1P3-201ENST00000434069 851 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RPL32P28-201ENST00000443577 397 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms