Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AL583843.1-201ENST00000456070 346 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 RNU7-23P-201ENST00000459465 62 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AP002884.2-201ENST00000471647 395 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC069439.1-201ENST00000494739 167 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC026801.1-201ENST00000497178 464 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC114786.4-201ENST00000508771 728 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 MTND3P25-201ENST00000509243 135 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 RNU1-95P-201ENST00000516357 160 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 RNU1-128P-201ENST00000516704 160 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 CENPUP1-201ENST00000526649 1202 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC078814.3-201ENST00000553036 491 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC234778.2-201ENST00000566241 354 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 HMGN2P15-201ENST00000585707 270 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC004852.3-201ENST00000614131 326 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 RNA5SP124-201ENST00000362739 110 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 Y_RNA.399-201ENST00000383955 105 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 RNU6-166P-201ENST00000384371 107 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 MIR670-201ENST00000390142 98 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AL356057.2-201ENST00000403318 432 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 RPL5P18-201ENST00000406671 891 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 RNA5SP293-201ENST00000410527 113 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 Y_RNA.623-201ENST00000411128 95 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 BX682237.1-201ENST00000415016 335 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AL353621.1-201ENST00000418219 243 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC245291.1-201ENST00000419501 328 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AP000907.1-201ENST00000428428 510 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 CYCSP32-201ENST00000440548 321 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 RNU7-167P-201ENST00000459160 62 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC074344.1-201ENST00000512823 224 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 RNU6-1038P-201ENST00000516516 104 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 SNORA70.19-201ENST00000516717 90 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 RNU6-1183P-201ENST00000517054 60 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 SNORA31.21-201ENST00000517180 77 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC026333.2-201ENST00000542164 106 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC008011.1-201ENST00000545989 227 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 NACAP3-201ENST00000552100 481 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AL118558.2-201ENST00000556294 238 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC074050.1-201ENST00000563247 211 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC008739.3-201ENST00000603262 127 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 RNU6-89P-201ENST00000606519 100 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 Z82243.1-201ENST00000609432 473 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 SNORA50A-202ENST00000629536 136 ntBASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40AQ8WXH6 AC007496.3-201ENST00000624987 3443 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 AC007823.1-201ENST00000569932 1566 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 RNU6-82P-201ENST00000363970 107 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 Y_RNA.378-201ENST00000365652 113 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 MIR449B-201ENST00000384995 97 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 RNA5SP219-201ENST00000390940 113 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 AL035423.1-201ENST00000420331 213 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 SRIP2-201ENST00000428470 166 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 AL627311.1-201ENST00000431514 115 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 AC125238.1-201ENST00000448842 249 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 NDUFB1P2-201ENST00000449477 176 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 RPS27P29-201ENST00000463110 252 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 RPL23AP67-201ENST00000465341 474 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 Y_RNA.654-201ENST00000497848 106 ntBASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.1□□□□□ -1.91
RAB40AQ8WXH6 MIR892C-201ENST00000516410 77 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms