Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.384-201ENST00000383909 102 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 RNU6-432P-201ENST00000384196 109 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 SNORD37.1-201ENST00000390968 65 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 RNU6-821P-201ENST00000390995 107 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AL109755.1-201ENST00000401791 649 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AL606923.1-201ENST00000406616 190 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AC092447.6-201ENST00000414578 210 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 ARL5AP1-201ENST00000418991 388 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 RPL23AP33-201ENST00000442301 452 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 PPP1R2P5-201ENST00000457256 603 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 SNORD97-201ENST00000459187 142 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 RNU7-66P-201ENST00000459469 62 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 SNORD19B-201ENST00000459623 84 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 RNU6-1092P-201ENST00000516955 87 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 RNA5SP503-201ENST00000517047 117 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 RN7SKP234-201ENST00000517173 224 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AP005597.4-201ENST00000526762 229 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AC020661.2-201ENST00000560114 134 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 POLR3GP2-201ENST00000588366 668 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AL022099.1-201ENST00000604551 712 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.9
LMO3Q8TAP4 AC121333.1-201ENST00000567488 2709 ntBASIC3.15□□□□□ -1.9
LMO3Q8TAP4 MTND4P14-201ENST00000435799 1354 ntBASIC3.15□□□□□ -1.9
LMO3Q8TAP4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LMO3Q8TAP4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LMO3Q8TAP4 RNU1-35P-201ENST00000362782 153 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 RNU6-179P-201ENST00000363350 107 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 RNU6-525P-201ENST00000363685 104 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 RNU6-1284P-201ENST00000363701 100 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 RNU6-188P-201ENST00000364207 107 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 Y_RNA.530-201ENST00000384587 101 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 Y_RNA.576-201ENST00000384781 102 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 SNORA48.5-201ENST00000391143 135 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 BTF3L4P3-201ENST00000418879 476 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AL353729.1-201ENST00000425044 720 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AC236972.2-201ENST00000434979 310 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AL162395.1-201ENST00000457882 422 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 snoU13.24-201ENST00000458998 104 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 RPS29P2-201ENST00000479278 136 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 CCDC34P1-201ENST00000507441 517 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 RNU6-864P-201ENST00000516256 108 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 RN7SKP57-201ENST00000517248 293 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AC009812.2-201ENST00000517657 457 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 MTND4P7-201ENST00000523876 130 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AC109635.4-202ENST00000531666 412 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AL121821.2-201ENST00000556081 394 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AL669831.4-202ENST00000590817 238 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 CTHRC1P1-201ENST00000605383 469 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AC025034.2-201ENST00000623264 286 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 AC008264.2-201ENST00000610193 3731 ntBASIC3.15□□□□□ -1.91
LMO3Q8TAP4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
LMO3Q8TAP4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 ZNF33CP-201ENST00000432492 2030 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 RNU6-82P-201ENST00000363970 107 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 Y_RNA.315-201ENST00000365117 102 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms