Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RPL21P90-201ENST00000415692 466 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 TOMM20P4-201ENST00000427861 435 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 AL360271.2-201ENST00000447710 161 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 RPS11P1-201ENST00000451072 473 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 PARP4P3-201ENST00000510265 317 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 RNA5SP49-201ENST00000516450 115 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 RNU6-971P-201ENST00000516920 106 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 AC067852.3-201ENST00000589177 561 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 AC174048.1-201ENST00000603389 144 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 AC140113.4-201ENST00000622087 222 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 AL592182.3-201ENST00000642132 3304 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NEDD1Q8NHV4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NEDD1Q8NHV4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
NEDD1Q8NHV4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
NEDD1Q8NHV4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 AC083843.3-201ENST00000623679 2186 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 SNORD116-14-201ENST00000383894 92 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 SNORD116-17-201ENST00000383929 92 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 SNORD63-201ENST00000384262 68 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 RNU6-933P-201ENST00000384424 107 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 SNORD116-15-201ENST00000384445 92 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 SNORD116-20-201ENST00000384529 92 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 SNORD116-19-201ENST00000384729 92 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 MIR190B-201ENST00000401119 79 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 AC069218.2-201ENST00000411665 344 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 AC127537.2-201ENST00000439258 465 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 SNORD2.1-201ENST00000458762 69 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 AC133134.1-201ENST00000466800 359 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 AC005912.1-201ENST00000495392 255 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 SNORD39.4-201ENST00000620099 78 ntBASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEDD1Q8NHV4 AC110774.1-201ENST00000623567 2018 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 RNU1-14P-201ENST00000362759 152 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 AC008481.1-201ENST00000463278 396 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 CYCTP-201ENST00000504253 315 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 RNA5SP73-201ENST00000516744 108 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 MRPL49P2-201ENST00000521066 465 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 ATP5J2P6-201ENST00000565203 266 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 MIR4659A-201ENST00000580269 81 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 AC123912.5-201ENST00000605470 343 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 AC006329.2-201ENST00000611491 394 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 FAM27D1-201ENST00000612308 341 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 AC090971.4-201ENST00000560291 1800 ntBASIC5.07□□□□□ -1.6
NEDD1Q8NHV4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 AC010332.2-201ENST00000613083 1904 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 NOL8P1-201ENST00000508336 3529 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 MIR383-201ENST00000362257 73 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 RNU6-898P-201ENST00000365627 104 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 RNU6-637P-201ENST00000384050 107 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 U3.29-201ENST00000391296 212 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 AC004975.1-201ENST00000428733 208 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms