Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 PPIAP31-201ENST00000405422 495 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 RN7SKP216-201ENST00000411050 312 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PHC3Q8NDX5 CBX3P6-201ENST00000430257 527 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 RPL23AP25-201ENST00000430973 463 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.48□□□□□ -1.69
PHC3Q8NDX5 AC131281.1-201ENST00000522984 164 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.48□□□□□ -1.69
PHC3Q8NDX5 AC040926.1-201ENST00000530195 238 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHC3Q8NDX5 AC006600.1-201ENST00000572529 153 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 MIR4330-201ENST00000579077 105 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 AC091178.1-203ENST00000584586 279 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 AC008745.1-201ENST00000604064 271 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 MIR6748-201ENST00000610433 71 ntBASIC4.48□□□□□ -1.69
PHC3Q8NDX5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHC3Q8NDX5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.48□□□□□ -1.69
PHC3Q8NDX5 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PHC3Q8NDX5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PHC3Q8NDX5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.48□□□□□ -1.69
PHC3Q8NDX5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 RN7SKP227-201ENST00000364445 330 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 RNA5SP167-201ENST00000365461 116 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 SNORA63.7-201ENST00000365579 123 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 SNORA56-201ENST00000383966 129 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 MIR659-201ENST00000384963 97 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 RNU6-1197P-201ENST00000391183 107 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 RPS12P10-201ENST00000427031 377 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 AL358472.1-201ENST00000431295 329 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 VDAC1P3-201ENST00000434069 851 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 RPL23AP93-201ENST00000440847 484 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 OSTCP8-201ENST00000445117 448 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 AL592156.1-201ENST00000508758 304 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 RNA5SP446-201ENST00000515955 82 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 SNORA70.14-201ENST00000516205 110 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 Y_RNA.715-201ENST00000517082 110 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 AP000827.1-201ENST00000527814 258 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 MIR5188-201ENST00000583467 113 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 VN1R91P-201ENST00000594377 169 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 AL158827.2-201ENST00000602494 330 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 SCARNA4-202ENST00000625402 129 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 AL691447.3-201ENST00000635020 330 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 U6.99-201ENST00000637524 83 ntBASIC4.47□□□□□ -1.69
PHC3Q8NDX5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.47□□□□□ -1.69
PHC3Q8NDX5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PHC3Q8NDX5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
PHC3Q8NDX5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PHC3Q8NDX5 AC118273.1-201ENST00000525324 3006 ntBASIC4.46□□□□□ -1.69
PHC3Q8NDX5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.46□□□□□ -1.69
PHC3Q8NDX5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PHC3Q8NDX5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PHC3Q8NDX5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHC3Q8NDX5 Y_RNA.106-201ENST00000363189 100 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 Y_RNA.210-201ENST00000364161 110 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 RNU6-1318P-201ENST00000365389 103 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 Y_RNA.476-201ENST00000384347 108 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 RNU6-713P-201ENST00000384761 107 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 MIR493-201ENST00000385254 89 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 RNU2-71P-201ENST00000411395 189 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.46□□□□□ -1.7
PHC3Q8NDX5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.46□□□□□ -1.7
PHC3Q8NDX5 RPEP3-201ENST00000425462 676 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 AL159987.2-201ENST00000432754 307 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 AL132765.1-201ENST00000434165 553 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 RPS3AP46-201ENST00000448352 682 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PHC3Q8NDX5 AC013470.1-201ENST00000453438 462 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 MTCO3P8-201ENST00000453691 755 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 HMGN2P7-201ENST00000456186 273 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 AP000873.1-201ENST00000463987 400 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 RPL30P5-201ENST00000494923 336 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 SLC25A15P5-201ENST00000508033 253 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.46□□□□□ -1.7
PHC3Q8NDX5 RNU6-612P-201ENST00000516909 102 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 RNU6-1271P-201ENST00000517049 105 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 RNU6-794P-201ENST00000517261 64 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.46□□□□□ -1.7
PHC3Q8NDX5 MIR4782-201ENST00000577987 79 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 MIR5696-201ENST00000578474 85 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 SRGNP1-201ENST00000603392 451 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 AC110741.2-201ENST00000605278 268 ntBASIC4.46□□□□□ -1.7
PHC3Q8NDX5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.46□□□□□ -1.7
PHC3Q8NDX5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHC3Q8NDX5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms