Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 Y_RNA.463-201ENST00000384271 102 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 SNORA3C-201ENST00000408792 125 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC096664.2-201ENST00000411843 406 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC023141.4-201ENST00000412031 328 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC074117.2-201ENST00000417130 397 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 BX276092.3-201ENST00000424182 230 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AL121776.1-201ENST00000429337 372 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AL031183.1-201ENST00000457667 207 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AL441985.1-201ENST00000457727 251 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AL163540.1-201ENST00000485382 386 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC068781.1-201ENST00000488231 618 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC096576.1-201ENST00000489014 359 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC104109.1-201ENST00000498563 436 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 RNU6-988P-201ENST00000519081 107 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC023442.1-201ENST00000531247 422 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 TRAV8-5-201ENST00000537369 341 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 RPL10P14-201ENST00000565265 298 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 MIR5047-201ENST00000579212 100 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AP001836.1-201ENST00000604675 523 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AL022401.1-201ENST00000619498 108 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 MIR6837-201ENST00000620884 64 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC007546.2-201ENST00000623996 360 ntBASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN3Q8NCR9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 Y_RNA.252-201ENST00000364556 101 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 RNU6-487P-201ENST00000365430 104 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 TBCAP2-201ENST00000416175 326 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 BX510359.2-201ENST00000417920 305 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 PTGES3P4-201ENST00000426243 356 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 RPS17P8-201ENST00000434525 335 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AL035666.1-201ENST00000446195 348 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 RPL21P23-201ENST00000446654 460 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 RPS3AP46-201ENST00000448352 682 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 RPS29P27-201ENST00000463711 170 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC107626.1-201ENST00000471084 183 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 OR2AO1P-201ENST00000476497 403 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 MTND5P9-201ENST00000503854 1755 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 SNORD59.2-201ENST00000516873 68 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 OR5D15P-201ENST00000531671 942 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC025281.1-201ENST00000567026 265 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC006504.6-201ENST00000590142 199 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC011445.2-201ENST00000599274 173 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AL356157.2-201ENST00000605122 111 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC097372.5-201ENST00000623665 376 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC241585.2-209ENST00000638217 143 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 AC006971.1-201ENST00000407916 4486 ntBASIC3.57□□□□□ -1.84
CLRN3Q8NCR9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 ZNF299P-201ENST00000406845 1804 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AC091152.2-201ENST00000591628 2569 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 SNORD56.1-201ENST00000362913 68 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 RNU1-18P-201ENST00000363062 164 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 RNU1-105P-201ENST00000363470 161 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 U3.6-201ENST00000363622 211 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 SNORA14A-201ENST00000364773 135 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AC117470.1-201ENST00000381974 330 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 RNU1-63P-201ENST00000383902 164 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 RNU6-843P-201ENST00000384454 104 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 RNU6-748P-201ENST00000384648 107 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 RNU6-19P-201ENST00000384718 107 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 MIR591-201ENST00000385290 95 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 snosnR66.1-201ENST00000391095 99 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 OR3A2-201ENST00000408891 1076 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms