Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL022099.1-201ENST00000604551 712 ntBASIC4.08□□□□□ -1.76
SYNE4Q8N205 AC073657.2-201ENST00000605661 303 ntBASIC4.08□□□□□ -1.76
SYNE4Q8N205 AC093732.2-201ENST00000607950 274 ntBASIC4.08□□□□□ -1.76
SYNE4Q8N205 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYNE4Q8N205 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYNE4Q8N205 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.08□□□□□ -1.76
SYNE4Q8N205 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SYNE4Q8N205 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SYNE4Q8N205 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SYNE4Q8N205 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SYNE4Q8N205 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.07□□□□□ -1.76
SYNE4Q8N205 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SYNE4Q8N205 RNU6-1309P-201ENST00000363305 108 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 Y_RNA.422-201ENST00000384054 114 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 RNU6-463P-201ENST00000384340 107 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SYNE4Q8N205 MTCYBP4-201ENST00000401524 249 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 AL592114.1-201ENST00000403842 483 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 AC107083.1-201ENST00000439643 279 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.07□□□□□ -1.76
SYNE4Q8N205 S100A11P1-201ENST00000477525 312 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 MTCO1P29-201ENST00000496868 288 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 VWA8P1-201ENST00000510889 176 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 MIR2276-201ENST00000516886 89 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 AC090281.1-201ENST00000523019 276 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.07□□□□□ -1.76
SYNE4Q8N205 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.07□□□□□ -1.76
SYNE4Q8N205 COX6CP3-201ENST00000580869 223 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 AC100830.2-201ENST00000581636 240 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 IGHV3-29-201ENST00000604817 344 ntBASIC4.07□□□□□ -1.76
SYNE4Q8N205 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.07□□□□□ -1.76
SYNE4Q8N205 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.07□□□□□ -1.76
SYNE4Q8N205 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.07□□□□□ -1.76
SYNE4Q8N205 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SYNE4Q8N205 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SYNE4Q8N205 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.06□□□□□ -1.76
SYNE4Q8N205 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SYNE4Q8N205 FTLP6-201ENST00000355274 422 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 RNA5SP322-201ENST00000363617 119 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 Y_RNA.197-201ENST00000364004 102 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE4Q8N205 RNU6-907P-201ENST00000390924 102 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE4Q8N205 NDUFS5P3-201ENST00000450668 321 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 MTCO3P10-201ENST00000455912 772 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 TRBV1-201ENST00000476502 284 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.06□□□□□ -1.76
SYNE4Q8N205 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SYNE4Q8N205 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.06□□□□□ -1.76
SYNE4Q8N205 AC008885.1-201ENST00000514930 301 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 RNA5SP503-201ENST00000517047 117 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 RNU6-1213P-201ENST00000517075 94 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 RNU4-60P-201ENST00000517239 135 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.06□□□□□ -1.76
SYNE4Q8N205 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE4Q8N205 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE4Q8N205 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE4Q8N205 AL133153.1-201ENST00000557756 303 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.06□□□□□ -1.76
SYNE4Q8N205 AC012669.1-201ENST00000603209 283 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 AL022345.1-201ENST00000607292 135 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 AC022893.3-201ENST00000607665 437 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 AL390240.1-201ENST00000612950 384 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 uc_338.34-201ENST00000617467 174 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 7SK.10-201ENST00000621414 298 ntBASIC4.06□□□□□ -1.76
SYNE4Q8N205 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SYNE4Q8N205 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SYNE4Q8N205 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.05□□□□□ -1.76
SYNE4Q8N205 Y_RNA.530-201ENST00000384587 101 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 RN7SKP158-201ENST00000410453 326 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 RNU2-39P-201ENST00000410604 198 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 RNA5SP229-201ENST00000410809 99 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 AC126124.2-201ENST00000413542 321 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 AL356968.1-201ENST00000416622 474 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 RPL31P12-201ENST00000422587 358 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 OOSP1P1-201ENST00000423265 274 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 AL137792.2-201ENST00000443484 235 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 AC008264.1-201ENST00000447612 367 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 ST13P14-201ENST00000474095 734 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 RPL21P93-201ENST00000480465 489 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNE4Q8N205 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.05□□□□□ -1.76
SYNE4Q8N205 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.05□□□□□ -1.76
SYNE4Q8N205 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.05□□□□□ -1.76
SYNE4Q8N205 AP000889.2-201ENST00000532684 490 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.05□□□□□ -1.76
SYNE4Q8N205 AC007938.3-201ENST00000604965 623 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 AP000654.2-201ENST00000605633 586 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 HMGN2P28-201ENST00000606102 262 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 AC004908.2-201ENST00000609090 574 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 Z82243.1-201ENST00000609432 473 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 AL132822.1-201ENST00000617063 513 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 U73479.1-201ENST00000618062 168 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 AC138305.3-201ENST00000624988 240 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNE4Q8N205 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SYNE4Q8N205 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SYNE4Q8N205 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SYNE4Q8N205 AP001350.1-201ENST00000601906 1524 ntBASIC4.05□□□□□ -1.76
SYNE4Q8N205 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms