Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 OR56A5-201ENST00000340110 738 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 U3.4-201ENST00000363352 213 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 SNORA7.4-201ENST00000384249 137 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 RNU6-72P-201ENST00000384285 79 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 RNU6-297P-201ENST00000384636 107 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 MIR454-201ENST00000390180 115 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 FTH1P15-201ENST00000406984 280 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 RAP1BP3-201ENST00000407180 549 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 RNU4-47P-201ENST00000410876 114 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 EEF1A1P40-201ENST00000412883 573 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 PIGFP2-201ENST00000421400 651 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 ISCA1P6-201ENST00000427740 390 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 MTCO3P5-201ENST00000433620 714 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AL022238.1-201ENST00000442557 355 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 HIGD1AP2-201ENST00000446367 280 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC104058.1-201ENST00000448028 297 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC009961.3-201ENST00000449832 765 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC009220.1-201ENST00000451614 275 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC091153.1-201ENST00000466297 402 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 MED28P2-201ENST00000475771 317 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC109925.1-201ENST00000478069 331 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AP004217.1-201ENST00000480579 346 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC096576.1-201ENST00000489014 359 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 SNORA18.6-201ENST00000516792 115 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 RNU6-1220P-201ENST00000517126 108 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC026407.1-201ENST00000518369 204 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC109329.1-201ENST00000518744 317 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AP005902.1-201ENST00000521358 186 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 MTCYBP20-201ENST00000524239 1129 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 OSBPL9P5-201ENST00000542581 171 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 CR383656.8-201ENST00000549046 145 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 MIR3160-1-201ENST00000577972 85 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 MIR4658-201ENST00000584344 65 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 CLIC4P2-201ENST00000601934 717 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 SEPT7P9-203ENST00000604116 343 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AL162713.1-201ENST00000604480 262 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 MIR98-201ENST00000606724 119 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC006566.1-201ENST00000608943 513 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 AC093648.1-201ENST00000623546 606 ntBASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 OR4G2P-201ENST00000328113 903 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 RNA5SP240-201ENST00000365355 128 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 Y_RNA.367-201ENST00000365544 101 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 MIR10A-201ENST00000385043 110 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AL139095.1-201ENST00000404326 391 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 RNU2-63P-201ENST00000410792 194 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 RNA5SP111-201ENST00000411386 101 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC016831.2-201ENST00000417179 352 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 C1DP2-201ENST00000418167 426 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC098826.1-201ENST00000433943 471 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC016691.1-201ENST00000441321 413 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 MTND1P27-201ENST00000451117 902 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 NUTF2P7-201ENST00000453086 375 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 BET1P1-201ENST00000482276 359 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 RN7SL20P-201ENST00000488827 297 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC026403.1-201ENST00000518938 295 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 RPS15AP11-201ENST00000594193 385 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 VN1R85P-201ENST00000601587 426 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC068790.2-201ENST00000602601 557 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AL121772.2-201ENST00000614331 297 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 RMST_4.1-201ENST00000616886 107 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC072046.2-201ENST00000618366 268 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 AC010378.1-201ENST00000619270 362 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms