Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 RNU1-70P-201ENST00000362618 164 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 RNU6-534P-201ENST00000364877 106 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 RNU6-116P-201ENST00000384042 109 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 RNU6-217P-201ENST00000384164 104 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 RNU6-140P-201ENST00000384566 108 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 SNORD37.1-201ENST00000390968 65 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AL354719.1-201ENST00000406535 843 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 RNU4-47P-201ENST00000410876 114 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 USP9YP6-201ENST00000413550 854 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AL356968.1-201ENST00000416622 474 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 RPL23AP22-201ENST00000437556 453 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 CALM1P1-201ENST00000442082 433 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 CECR9-201ENST00000453421 199 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC109925.1-201ENST00000478069 331 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 RPL30P14-201ENST00000482744 348 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 FAM92A1P2-202ENST00000504766 877 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC006445.2-201ENST00000510061 472 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AMZ2P1-203ENST00000565833 850 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC068135.2-201ENST00000569293 1028 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 MIR3609-201ENST00000582661 80 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 MIR4801-201ENST00000582704 82 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 NRBF2P5-201ENST00000603087 788 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC099778.2-201ENST00000610904 211 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC024940.5-201ENST00000622889 474 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.01□□□□□ -1.93
BEST3Q8N1M1 MTND5P27-201ENST00000428871 1720 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AL353743.1-202ENST00000431724 1695 ntBASIC3.01□□□□□ -1.93
BEST3Q8N1M1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3□□□□□ -1.93
BEST3Q8N1M1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
BEST3Q8N1M1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
BEST3Q8N1M1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
BEST3Q8N1M1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3□□□□□ -1.93
BEST3Q8N1M1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
BEST3Q8N1M1 RPL7P26-201ENST00000333817 754 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 SNORA4.3-201ENST00000365564 137 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 RNU6-1035P-201ENST00000384477 107 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 SNORA48.5-201ENST00000391143 135 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 UBE2V1P2-201ENST00000397758 440 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 NDUFB4P4-201ENST00000404822 243 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3□□□□□ -1.93
BEST3Q8N1M1 RNU6-193P-201ENST00000410977 107 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 AC096664.2-201ENST00000411843 406 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 MTND1P23-201ENST00000416931 372 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3□□□□□ -1.93
BEST3Q8N1M1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3□□□□□ -1.93
BEST3Q8N1M1 SNRPEP9-201ENST00000436794 238 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3□□□□□ -1.93
BEST3Q8N1M1 RN7SL863P-201ENST00000462370 296 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 RPL23AP11-201ENST00000475260 469 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 AC021205.2-201ENST00000480069 347 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3□□□□□ -1.93
BEST3Q8N1M1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3□□□□□ -1.93
BEST3Q8N1M1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3□□□□□ -1.93
BEST3Q8N1M1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3□□□□□ -1.93
BEST3Q8N1M1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3□□□□□ -1.93
BEST3Q8N1M1 RNU6-1315P-201ENST00000517187 99 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 AL137161.1-201ENST00000532231 390 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3□□□□□ -1.93
BEST3Q8N1M1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3□□□□□ -1.93
BEST3Q8N1M1 AC004805.2-201ENST00000605382 482 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 uc_338.1-201ENST00000612113 180 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 AL138880.2-201ENST00000616214 239 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 SNORD39.4-201ENST00000620099 78 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 AC010338.1-201ENST00000621823 717 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3□□□□□ -1.93
BEST3Q8N1M1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
BEST3Q8N1M1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
BEST3Q8N1M1 AL354685.2-201ENST00000448218 1447 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
BEST3Q8N1M1 AC091152.2-201ENST00000591628 2569 ntBASIC3□□□□□ -1.93
BEST3Q8N1M1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
BEST3Q8N1M1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3□□□□□ -1.93
BEST3Q8N1M1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 NACAP2-201ENST00000318548 624 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 FTLP6-201ENST00000355274 422 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AL606923.1-201ENST00000406616 190 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 RNU2-68P-201ENST00000410878 191 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 RNU6-1068P-201ENST00000410958 103 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 MTND1P2-201ENST00000430604 821 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms