Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 Y_RNA.183-201ENST00000363882 113 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 RNU6-280P-201ENST00000364145 104 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 Y_RNA.539-201ENST00000384635 107 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 AC099677.1-201ENST00000420575 175 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 RPL7L1P1-201ENST00000448259 785 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 NDUFB1P2-201ENST00000449477 176 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 RNA5SP246-201ENST00000458909 119 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 RNU6-953P-201ENST00000459154 107 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 snoU13.3-201ENST00000459441 104 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 RNU6-911P-201ENST00000516523 104 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 Y_RNA.687-201ENST00000516558 91 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 AC109329.1-201ENST00000518744 317 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 AL355877.2-201ENST00000603670 358 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 AC006023.2-201ENST00000609916 167 ntBASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMEFF1Q8IYR6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TMEFF1Q8IYR6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TMEFF1Q8IYR6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.15□□□□□ -1.74
TMEFF1Q8IYR6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.15□□□□□ -1.74
TMEFF1Q8IYR6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-662P-201ENST00000384253 104 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 Y_RNA.471-201ENST00000384312 102 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 MIR195-201ENST00000385194 87 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 SNORD73A-201ENST00000386062 65 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 MIR1911-201ENST00000410783 80 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 RNU2-25P-201ENST00000411041 191 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 RNU2-14P-201ENST00000411053 191 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 SNORA74C-2-201ENST00000411179 201 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 RPL21P90-201ENST00000415692 466 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 AL691449.1-201ENST00000426570 421 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 MYL8P-204ENST00000431574 518 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-513P-201ENST00000516104 104 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 AC006064.5-201ENST00000541782 248 ntBASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
TMEFF1Q8IYR6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 MAPK10-286ENST00000641208 8747 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 MIR335-201ENST00000362173 94 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 RNA5SP124-201ENST00000362739 110 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-774P-201ENST00000363238 107 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 RNY1-201ENST00000364228 113 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-886P-201ENST00000384319 105 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 RNU6-817P-201ENST00000391083 104 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 RNU4-78P-201ENST00000410940 126 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AC093578.1-201ENST00000415219 368 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AL139109.1-201ENST00000455491 297 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 NDUFB4P9-201ENST00000511646 388 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 RN7SKP289-201ENST00000517244 295 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AC034114.1-201ENST00000520293 285 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AC087369.1-201ENST00000520775 996 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AC004584.2-201ENST00000570407 410 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 OR1M4P-201ENST00000589199 287 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AC005255.1-201ENST00000593748 216 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AC012669.1-201ENST00000603209 283 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AC005344.1-201ENST00000613391 459 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AL121772.2-201ENST00000614331 297 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 AL031601.2-202ENST00000622650 282 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMEFF1Q8IYR6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms