Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU6-72P-201ENST00000384285 79 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 RPL21P17-201ENST00000397467 475 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 U3.37-201ENST00000408528 213 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AL117339.3-201ENST00000418733 162 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 HMGN2P27-201ENST00000427352 270 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AC099799.1-201ENST00000439809 192 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 HIGD1AP2-201ENST00000446367 280 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AC020593.1-201ENST00000507399 299 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 RNU2-53P-201ENST00000516257 147 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 RNA5SP49-201ENST00000516450 115 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 RNU6-1183P-201ENST00000517054 60 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AC091178.1-203ENST00000584586 279 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AC125232.2-201ENST00000592457 143 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AL021879.1-201ENST00000611756 288 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 MIR6076-201ENST00000617521 113 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AL606534.2-204ENST00000635008 178 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 RNU1-35P-201ENST00000362782 153 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 Y_RNA.288-201ENST00000364854 92 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 RNU6-55P-201ENST00000411092 107 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 AL159987.2-201ENST00000432754 307 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 AC011816.1-201ENST00000441346 546 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 FTH1P25-201ENST00000447665 469 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 RNU6-475P-201ENST00000516073 104 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 AC007375.1-201ENST00000554513 578 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 H3F3AP1-201ENST00000559984 334 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 AC112484.5-201ENST00000624189 228 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 AC008785.1-201ENST00000624475 456 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 MTND5P7-201ENST00000413558 1798 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 AC002546.1-201ENST00000588041 2504 ntBASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.73□□□□□ -1.65
NPAS4Q8IUM7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 MIR372-201ENST00000362225 67 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 Y_RNA.152-201ENST00000363578 100 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 Y_RNA.222-201ENST00000364264 102 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 RNU6-1317P-201ENST00000364582 104 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 Y_RNA.380-201ENST00000365663 111 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 RNU6-1062P-201ENST00000383908 107 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 RNU6-842P-201ENST00000384269 107 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AC096664.2-201ENST00000411843 406 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AL356095.1-201ENST00000417217 199 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AC087650.1-201ENST00000431445 468 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AC112492.4-201ENST00000456549 352 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 RNU6-1132P-201ENST00000459214 107 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AC069499.1-201ENST00000489433 509 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 HMGB3P17-201ENST00000504195 649 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AL592156.1-201ENST00000508758 304 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AC022616.4-201ENST00000522985 181 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AP000889.1-201ENST00000530968 660 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 MIR3609-201ENST00000582661 80 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 MIR4660-201ENST00000583549 74 ntBASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPAS4Q8IUM7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NPAS4Q8IUM7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
NPAS4Q8IUM7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 Y_RNA.39-201ENST00000362620 98 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 RNU6-778P-201ENST00000363269 103 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 RNU6-884P-201ENST00000363889 107 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AL359837.1-201ENST00000381357 287 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 MIR521-1-201ENST00000384902 87 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AL591034.2-201ENST00000402839 359 ntBASIC4.71□□□□□ -1.66
NPAS4Q8IUM7 AL592291.1-201ENST00000403830 352 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms