Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 MIR147B-201ENST00000390185 80 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AL512633.1-201ENST00000399931 655 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AL590004.2-201ENST00000404787 371 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AL031121.1-201ENST00000406553 254 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 SNORD88.1-201ENST00000408684 91 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 RNA5SP111-201ENST00000411386 101 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 RPL31P35-201ENST00000431058 377 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AC009961.2-201ENST00000435771 251 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.96□□□□□ -1.94
PRPF39Q86UA1 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.96□□□□□ -1.94
PRPF39Q86UA1 SCARNA24.1-201ENST00000516465 137 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 SNORD19.2-201ENST00000516978 73 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AC009902.1-201ENST00000519351 183 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.96□□□□□ -1.94
PRPF39Q86UA1 NRBF2P5-201ENST00000603087 788 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.96□□□□□ -1.94
PRPF39Q86UA1 Z69908.1-201ENST00000622603 247 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRPF39Q86UA1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.96□□□□□ -1.94
PRPF39Q86UA1 ASNSP3-201ENST00000451989 1306 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 RNU6-169P-201ENST00000365336 107 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 RNU6-19P-201ENST00000384718 107 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 CISD1P1-201ENST00000393907 327 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 BX295541.1-201ENST00000417774 250 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 C1DP2-201ENST00000418167 426 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 RPS15AP7-201ENST00000439294 405 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AL078601.1-201ENST00000444542 271 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC092001.1-201ENST00000453012 261 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 BTF3P15-201ENST00000455606 336 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 RPS29P26-201ENST00000477483 171 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 RNU5F-8P-201ENST00000515941 111 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 RNU6-410P-201ENST00000517006 107 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 SNORA31.18-201ENST00000517043 134 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC098848.2-201ENST00000588023 330 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC245014.2-201ENST00000603689 287 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC007938.3-201ENST00000604965 623 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC246785.4-201ENST00000605374 287 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC126118.1-201ENST00000607744 628 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AC107871.2-201ENST00000612894 502 ntBASIC2.95□□□□□ -1.94
PRPF39Q86UA1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.95□□□□□ -1.94
PRPF39Q86UA1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 RPL9P7-201ENST00000330965 580 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 RPL21P75-201ENST00000396599 483 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 UBE2V1P2-201ENST00000397758 440 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 RPL21P28-201ENST00000401418 483 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AL592114.1-201ENST00000403842 483 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AL139281.1-201ENST00000422120 335 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC244505.5-201ENST00000443639 207 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 MTND2P4-201ENST00000445034 1004 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AL441985.1-201ENST00000457727 251 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 RPL21P39-201ENST00000463605 483 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 RPL21P93-201ENST00000480465 489 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC087190.1-201ENST00000484462 480 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC093591.1-201ENST00000491435 481 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 RPL21P16-201ENST00000495531 483 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC116562.3-201ENST00000506136 177 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 RNU6-581P-201ENST00000516214 105 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC068587.5-201ENST00000528506 175 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 GTF3AP2-201ENST00000557014 266 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 LINC00933-203ENST00000559812 219 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC023043.3-201ENST00000593113 385 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC064872.1-201ENST00000604823 1072 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AL670379.4-201ENST00000605279 254 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AL121992.2-201ENST00000606262 256 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AL157786.1-207ENST00000627771 695 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AL161431.1-201ENST00000618966 4205 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms