Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AL591043.1-201ENST00000432461 424 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AL031663.1-201ENST00000437445 219 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 TRGVB-201ENST00000453257 471 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 RPL31P60-201ENST00000478450 367 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC139453.3-201ENST00000493276 369 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC112518.2-201ENST00000508565 425 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 RNU6-229P-201ENST00000516614 102 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 SCARNA11.3-201ENST00000517276 130 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 MIR3921-201ENST00000577308 85 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC021749.1-201ENST00000604322 607 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC009974.1-201ENST00000608881 455 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 MTCO1P23-201ENST00000415223 1526 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 MIR409-201ENST00000362237 79 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 Y_RNA.142-201ENST00000363491 102 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 RNU6-98P-201ENST00000384173 107 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 RNU6-837P-201ENST00000391056 108 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 RN7SKP61-201ENST00000410642 295 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 RPS15AP40-201ENST00000419621 391 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 HSPE1P21-201ENST00000438283 308 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 RPS27P26-201ENST00000494583 239 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 AC095031.1-201ENST00000623685 672 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 AC068787.1-201ENST00000623908 691 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 AP003476.1-201ENST00000623984 516 ntBASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CSPG4Q6UVK1 SNORD114-15-201ENST00000364687 72 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 U3.13-201ENST00000364804 214 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 RNU6-1083P-201ENST00000384022 107 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 Y_RNA.571-201ENST00000384753 98 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 MIR329-1-201ENST00000385028 80 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 RNU6-712P-201ENST00000410558 100 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 OR9R1P-201ENST00000412200 877 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AL109913.1-201ENST00000421173 514 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 RNU6-420P-201ENST00000458780 107 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AC005908.1-201ENST00000468701 347 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 TPT1P8-201ENST00000510120 555 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AL078605.1-201ENST00000603529 500 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AC010738.1-201ENST00000604970 987 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AL513185.3-201ENST00000433335 1300 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 SNORA22-201ENST00000383907 134 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 RNU6-30P-201ENST00000384561 107 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 SNORA22C-201ENST00000384614 134 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 OR52A4P-202ENST00000481634 799 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 RNU7-193P-201ENST00000516723 65 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 OR5B19P-201ENST00000531766 928 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 CYP4A27P-201ENST00000567218 190 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 MIR4802-201ENST00000581881 80 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 AC055876.5-201ENST00000605667 259 ntBASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.5□□□□□ -2.33
CSPG4Q6UVK1 Y_RNA.493-201ENST00000384422 102 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 RNA5SP25-201ENST00000410815 110 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 MTCO3P12-201ENST00000416718 547 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 RPL39P29-201ENST00000447779 157 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 RNU6-758P-201ENST00000516292 89 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 HAUS1P3-201ENST00000523909 662 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AC010186.2-204ENST00000537668 439 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 ZNF92P3-201ENST00000596594 954 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AP001330.4-201ENST00000604350 154 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AL009028.1-201ENST00000604895 802 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AC090132.2-201ENST00000615881 347 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 Pinc.1-201ENST00000616452 154 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 ZNF29P-201ENST00000225587 168 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 SNORA25.8-201ENST00000364831 128 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 RNU6-733P-201ENST00000410759 104 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms