Protein–RNA interactions for Protein: Q4LDR2

CTXN3, Cortexin-3, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTXN3Q4LDR2 RNU6-1090P-201ENST00000364065 94 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 Y_RNA.255-201ENST00000364581 97 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 RNU1-140P-201ENST00000365040 165 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 SNORD15B-201ENST00000384714 146 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 RNU6-903P-201ENST00000391270 109 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 RNU4-46P-201ENST00000410818 138 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 EIF1P1-201ENST00000421436 341 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 UBE2V1P8-201ENST00000437166 265 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 HMGB3P8-201ENST00000449709 577 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 TRBV1-201ENST00000476502 284 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AL157687.1-201ENST00000554853 619 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AL157871.3-201ENST00000557231 293 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 MIR1273C-201ENST00000578669 77 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC092794.1-201ENST00000612734 582 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC004852.3-201ENST00000614131 326 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 U6atac.1-201ENST00000616025 117 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 AC091903.1-201ENST00000624322 454 ntBASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTXN3Q4LDR2 HSPA8P4-201ENST00000511877 1920 ntBASIC3.34□□□□□ -1.88
CTXN3Q4LDR2 MTND4P35-201ENST00000604257 1375 ntBASIC3.34□□□□□ -1.88
CTXN3Q4LDR2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CTXN3Q4LDR2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CTXN3Q4LDR2 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.88
CTXN3Q4LDR2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 Y_RNA.402-201ENST00000383972 102 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 SNORD115-47-201ENST00000391226 86 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 MIR888-201ENST00000401186 77 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 RNU6-1025P-201ENST00000410629 104 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 RNU6-55P-201ENST00000411092 107 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 RNU6-954P-201ENST00000411355 107 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 HMGN2P30-201ENST00000423237 256 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 RPL35AP12-201ENST00000425362 338 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 MTCO1P20-201ENST00000425366 358 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 USP9YP18-201ENST00000425912 695 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AP001486.1-201ENST00000463339 476 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AL121769.1-201ENST00000469473 401 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 MTND4LP22-201ENST00000508209 276 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC011352.1-201ENST00000512300 793 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 SNORA31.21-201ENST00000517180 77 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC009812.2-201ENST00000517657 457 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 MTND1P5-201ENST00000517906 940 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 MTND4LP26-201ENST00000518144 282 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 HIF1AP1-201ENST00000553642 175 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 BNIP3P30-201ENST00000601184 574 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AL162413.1-201ENST00000603198 110 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 NUTF2P8-201ENST00000604593 363 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 MTND4LP5-201ENST00000605152 292 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 MIR622-201ENST00000638396 96 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 AL365361.1-201ENST00000566942 3481 ntBASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
CTXN3Q4LDR2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 Y_RNA.33-201ENST00000362591 102 ntBASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 RNA5SP139-201ENST00000364340 117 ntBASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 RNU6-1027P-201ENST00000383998 107 ntBASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 Y_RNA.450-201ENST00000384198 113 ntBASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 SNORD37.1-201ENST00000390968 65 ntBASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 SAR1AP2-201ENST00000392696 594 ntBASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 AL122016.1-201ENST00000403365 367 ntBASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 CIR1P3-201ENST00000405137 479 ntBASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 EEF1A1P40-201ENST00000412883 573 ntBASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.32□□□□□ -1.88
CTXN3Q4LDR2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms