Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 MTCYBP23-201ENST00000558717 1102 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.66□□□□□ -2.14
SSX1Q16384 AC024614.2-201ENST00000577584 372 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX1Q16384 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.66□□□□□ -2.14
SSX1Q16384 AC068790.3-201ENST00000602988 553 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 AL096840.1-201ENST00000603287 93 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.15-201ENST00000611544 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.16-201ENST00000613119 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.12-201ENST00000613778 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.20-201ENST00000613956 192 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.9-201ENST00000615427 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.11-201ENST00000616345 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 AC009233.1-201ENST00000616477 371 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.2-201ENST00000616535 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.3-201ENST00000617785 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.19-201ENST00000618602 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 RNU2-1-201ENST00000618664 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.6-201ENST00000619225 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.5-201ENST00000619465 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 U2.10-201ENST00000620268 191 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 AC244517.12-201ENST00000623581 663 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 AC091932.3-201ENST00000624223 323 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 AP002371.2-201ENST00000624450 503 ntBASIC1.66□□□□□ -2.14
SSX1Q16384 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.66□□□□□ -2.14
SSX1Q16384 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.66□□□□□ -2.14
SSX1Q16384 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SSX1Q16384 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX1Q16384 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.65□□□□□ -2.15
SSX1Q16384 SNORA4.1-201ENST00000364263 144 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 RNU4-68P-201ENST00000364314 141 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AL355143.1-201ENST00000407101 841 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 PIGPP2-201ENST00000411569 458 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.65□□□□□ -2.15
SSX1Q16384 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.65□□□□□ -2.15
SSX1Q16384 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.65□□□□□ -2.15
SSX1Q16384 HMGB1P27-201ENST00000431429 603 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 UBE2D3P1-201ENST00000436669 444 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 EXOSC3P1-201ENST00000448649 500 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.65□□□□□ -2.15
SSX1Q16384 AC092001.1-201ENST00000453012 261 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.65□□□□□ -2.15
SSX1Q16384 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.65□□□□□ -2.15
SSX1Q16384 AC134050.1-201ENST00000495088 933 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AC106872.3-201ENST00000495104 446 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.65□□□□□ -2.15
SSX1Q16384 AC010486.1-201ENST00000511793 424 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.65□□□□□ -2.15
SSX1Q16384 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SSX1Q16384 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.65□□□□□ -2.15
SSX1Q16384 AC136618.2-201ENST00000575091 400 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
SSX1Q16384 AC022662.1-201ENST00000580252 331 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 MIR544B-201ENST00000582372 78 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.65□□□□□ -2.15
SSX1Q16384 MTCYBP22-201ENST00000603788 447 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AL138963.2-201ENST00000605137 226 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AL592221.1-201ENST00000605266 382 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 BCRP9-201ENST00000605312 388 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AC072039.2-201ENST00000608883 439 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.65□□□□□ -2.15
SSX1Q16384 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SSX1Q16384 U4atac.1-201ENST00000618345 95 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AC013470.4-201ENST00000619978 986 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 AL356596.1-201ENST00000624230 379 ntBASIC1.65□□□□□ -2.15
SSX1Q16384 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.65□□□□□ -2.15
SSX1Q16384 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.65□□□□□ -2.15
SSX1Q16384 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SSX1Q16384 RNU4-92P-201ENST00000363783 136 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 RNU5A-8P-201ENST00000364102 114 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.64□□□□□ -2.15
SSX1Q16384 Z98749.2-208ENST00000381646 500 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 RNU6-723P-201ENST00000383973 107 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 RNU6-769P-201ENST00000384407 104 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 RNU6-278P-201ENST00000390945 109 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 RN7SKP158-201ENST00000410453 326 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.64□□□□□ -2.15
SSX1Q16384 OR51A5P-201ENST00000415429 942 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.64□□□□□ -2.15
SSX1Q16384 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.64□□□□□ -2.15
SSX1Q16384 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.64□□□□□ -2.15
SSX1Q16384 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.64□□□□□ -2.15
SSX1Q16384 MTATP6P14-201ENST00000455189 673 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 snoU109.3-201ENST00000459477 145 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SSX1Q16384 AC112206.4-201ENST00000515142 405 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 AP000907.2-201ENST00000530827 353 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 AC118273.2-201ENST00000532092 465 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SSX1Q16384 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.64□□□□□ -2.15
SSX1Q16384 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.64□□□□□ -2.15
SSX1Q16384 AC068276.1-201ENST00000605793 379 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 AL355472.4-201ENST00000610233 626 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.64□□□□□ -2.15
SSX1Q16384 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.64□□□□□ -2.15
SSX1Q16384 AP003400.5-201ENST00000624827 617 ntBASIC1.64□□□□□ -2.15
SSX1Q16384 AC099654.9-201ENST00000637055 678 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms