Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.43□□□□□ -2.34
PRKDCP78527 RNU7-26P-201ENST00000458980 63 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 snoU13.7-201ENST00000459220 104 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 KLF3P2-201ENST00000465138 268 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AC139453.3-201ENST00000493276 369 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.43□□□□□ -2.34
PRKDCP78527 AC108120.2-201ENST00000512973 294 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 RN7SKP277-201ENST00000516895 283 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.43□□□□□ -2.34
PRKDCP78527 AC008749.1-201ENST00000597650 306 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AL021997.1-201ENST00000605757 193 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AC103710.4-201ENST00000609301 899 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 SNORA63.3-201ENST00000362682 132 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.43□□□□□ -2.34
PRKDCP78527 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.43□□□□□ -2.34
PRKDCP78527 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.43□□□□□ -2.34
PRKDCP78527 AP004371.1-201ENST00000525240 214 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AC092470.1-201ENST00000546187 132 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 MIR3126-201ENST00000577443 74 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.43□□□□□ -2.34
PRKDCP78527 AC006213.5-201ENST00000619673 288 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 MIR6866-201ENST00000638146 69 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 SDAD1P2-201ENST00000441308 2028 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 Y_RNA.142-201ENST00000363491 102 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
PRKDCP78527 PABPC1P3-201ENST00000469174 459 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.43□□□□□ -2.34
PRKDCP78527 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.43□□□□□ -2.34
PRKDCP78527 AC084033.1-201ENST00000550830 633 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AL133241.1-201ENST00000556832 487 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.43□□□□□ -2.34
PRKDCP78527 MIR3921-201ENST00000577308 85 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AL009028.1-201ENST00000604895 802 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 AC013468.1-201ENST00000608680 598 ntBASIC0.43□□□□□ -2.34
PRKDCP78527 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
PRKDCP78527 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
PRKDCP78527 AC016716.1-201ENST00000265882 708 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 SNORD65-201ENST00000391079 73 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
PRKDCP78527 AC006548.1-201ENST00000427470 102 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.42□□□□□ -2.34
PRKDCP78527 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.42□□□□□ -2.34
PRKDCP78527 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.42□□□□□ -2.34
PRKDCP78527 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.42□□□□□ -2.34
PRKDCP78527 AL109918.3-201ENST00000603072 338 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 AC055764.2-201ENST00000610089 670 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 DUSP12P1-201ENST00000612874 516 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 CR381572.1-201ENST00000625098 102 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.42□□□□□ -2.34
PRKDCP78527 MTCO1P23-201ENST00000415223 1526 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 SNORA8-201ENST00000384574 139 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 AL589880.1-201ENST00000448271 287 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 C1DP3-201ENST00000455013 423 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 AC010099.1-201ENST00000455434 375 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.42□□□□□ -2.34
PRKDCP78527 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.42□□□□□ -2.34
PRKDCP78527 LINC00557-201ENST00000563184 1279 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 MIR3609-201ENST00000582661 80 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.42□□□□□ -2.34
PRKDCP78527 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
PRKDCP78527 RNA5SP266-201ENST00000410273 108 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.42□□□□□ -2.34
PRKDCP78527 MTND5P15-201ENST00000434246 349 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.42□□□□□ -2.34
PRKDCP78527 snoU13.4-201ENST00000458916 104 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.42□□□□□ -2.34
PRKDCP78527 AC005741.1-201ENST00000511094 432 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.42□□□□□ -2.34
PRKDCP78527 AC025588.2-201ENST00000604851 466 ntBASIC0.42□□□□□ -2.34
PRKDCP78527 AL513475.1-201ENST00000406602 315 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 VN1R36P-201ENST00000414936 291 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AC093155.1-201ENST00000440164 826 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AL161788.1-201ENST00000441805 169 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.41□□□□□ -2.34
PRKDCP78527 MIR548Y-201ENST00000582739 110 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AL355877.2-201ENST00000603670 358 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AC024060.1-201ENST00000607052 494 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AC005021.1-201ENST00000608730 355 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AL161423.1-201ENST00000613700 262 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AC097372.4-201ENST00000625025 466 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.41□□□□□ -2.34
PRKDCP78527 snoU13.19-201ENST00000459148 104 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.41□□□□□ -2.34
PRKDCP78527 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.41□□□□□ -2.34
PRKDCP78527 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.41□□□□□ -2.34
PRKDCP78527 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.41□□□□□ -2.34
PRKDCP78527 AP006248.3-201ENST00000623580 594 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AL356131.1-201ENST00000405826 414 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 RNA5SP450-201ENST00000411206 102 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AC092628.1-201ENST00000436250 252 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.41□□□□□ -2.34
PRKDCP78527 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.41□□□□□ -2.34
PRKDCP78527 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.41□□□□□ -2.34
PRKDCP78527 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.41□□□□□ -2.34
PRKDCP78527 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.41□□□□□ -2.34
PRKDCP78527 MIR3198-2-201ENST00000577868 80 ntBASIC0.41□□□□□ -2.34
PRKDCP78527 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.41□□□□□ -2.34
PRKDCP78527 AP002826.1-201ENST00000608835 315 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms