Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RPS4XP2-201ENST00000458402 793 ntBASIC3.32□□□□□ -1.88
RAE1P78406 U3.44-201ENST00000458938 192 ntBASIC3.32□□□□□ -1.88
RAE1P78406 AC087884.1-201ENST00000469738 328 ntBASIC3.32□□□□□ -1.88
RAE1P78406 AL135752.1-201ENST00000479477 471 ntBASIC3.32□□□□□ -1.88
RAE1P78406 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.32□□□□□ -1.88
RAE1P78406 HMGN1P11-201ENST00000508668 303 ntBASIC3.32□□□□□ -1.88
RAE1P78406 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.32□□□□□ -1.88
RAE1P78406 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.32□□□□□ -1.88
RAE1P78406 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.32□□□□□ -1.88
RAE1P78406 SNORA70.14-201ENST00000516205 110 ntBASIC3.32□□□□□ -1.88
RAE1P78406 RNU6-1088P-201ENST00000516850 104 ntBASIC3.32□□□□□ -1.88
RAE1P78406 MIR2276-201ENST00000516886 89 ntBASIC3.32□□□□□ -1.88
RAE1P78406 CASP1P1-201ENST00000526345 212 ntBASIC3.32□□□□□ -1.88
RAE1P78406 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.32□□□□□ -1.88
RAE1P78406 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.32□□□□□ -1.88
RAE1P78406 MIR3672-201ENST00000584290 82 ntBASIC3.32□□□□□ -1.88
RAE1P78406 AC002044.1-201ENST00000606707 158 ntBASIC3.32□□□□□ -1.88
RAE1P78406 SNORD39.4-201ENST00000620099 78 ntBASIC3.32□□□□□ -1.88
RAE1P78406 AL031601.2-202ENST00000622650 282 ntBASIC3.32□□□□□ -1.88
RAE1P78406 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.32□□□□□ -1.88
RAE1P78406 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.32□□□□□ -1.88
RAE1P78406 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.32□□□□□ -1.88
RAE1P78406 AC118273.1-201ENST00000525324 3006 ntBASIC3.32□□□□□ -1.88
RAE1P78406 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
RAE1P78406 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RAE1P78406 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RAE1P78406 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RAE1P78406 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RAE1P78406 AC005183.1-201ENST00000603687 1979 ntBASIC3.31□□□□□ -1.88
RAE1P78406 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RAE1P78406 RNU4-79P-201ENST00000362764 141 ntBASIC3.31□□□□□ -1.88
RAE1P78406 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RAE1P78406 AP002088.1-201ENST00000382740 395 ntBASIC3.31□□□□□ -1.88
RAE1P78406 RNU6-128P-201ENST00000383976 107 ntBASIC3.31□□□□□ -1.88
RAE1P78406 MIR325-201ENST00000385260 98 ntBASIC3.31□□□□□ -1.88
RAE1P78406 MIR450B-201ENST00000401182 78 ntBASIC3.31□□□□□ -1.88
RAE1P78406 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.31□□□□□ -1.88
RAE1P78406 VN1R36P-201ENST00000414936 291 ntBASIC3.31□□□□□ -1.88
RAE1P78406 AL139396.1-201ENST00000421137 167 ntBASIC3.31□□□□□ -1.88
RAE1P78406 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RAE1P78406 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.31□□□□□ -1.88
RAE1P78406 AC233279.1-201ENST00000455300 423 ntBASIC3.31□□□□□ -1.88
RAE1P78406 RPS23P3-201ENST00000470993 430 ntBASIC3.31□□□□□ -1.88
RAE1P78406 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RAE1P78406 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.31□□□□□ -1.88
RAE1P78406 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.31□□□□□ -1.88
RAE1P78406 RN7SKP13-201ENST00000515933 244 ntBASIC3.31□□□□□ -1.88
RAE1P78406 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
RAE1P78406 RNU1-95P-201ENST00000516357 160 ntBASIC3.31□□□□□ -1.88
RAE1P78406 RNU1-128P-201ENST00000516704 160 ntBASIC3.31□□□□□ -1.88
RAE1P78406 RNU6-1282P-201ENST00000516735 96 ntBASIC3.31□□□□□ -1.88
RAE1P78406 RNU6-273P-201ENST00000516937 96 ntBASIC3.31□□□□□ -1.88
RAE1P78406 AC069113.1-201ENST00000517763 267 ntBASIC3.31□□□□□ -1.88
RAE1P78406 AC009902.1-201ENST00000519351 183 ntBASIC3.31□□□□□ -1.88
RAE1P78406 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.31□□□□□ -1.88
RAE1P78406 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.31□□□□□ -1.88
RAE1P78406 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.31□□□□□ -1.88
RAE1P78406 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
RAE1P78406 AC106785.1-201ENST00000565935 262 ntBASIC3.31□□□□□ -1.88
RAE1P78406 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.31□□□□□ -1.88
RAE1P78406 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.31□□□□□ -1.88
RAE1P78406 AL356055.1-201ENST00000602528 446 ntBASIC3.31□□□□□ -1.88
RAE1P78406 AC113139.1-201ENST00000605049 239 ntBASIC3.31□□□□□ -1.88
RAE1P78406 AL138726.1-201ENST00000614873 333 ntBASIC3.31□□□□□ -1.88
RAE1P78406 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RAE1P78406 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.31□□□□□ -1.88
RAE1P78406 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
RAE1P78406 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RAE1P78406 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.3□□□□□ -1.88
RAE1P78406 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RAE1P78406 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.3□□□□□ -1.88
RAE1P78406 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RAE1P78406 MIR412-201ENST00000362142 91 ntBASIC3.3□□□□□ -1.88
RAE1P78406 Y_RNA.339-201ENST00000365325 102 ntBASIC3.3□□□□□ -1.88
RAE1P78406 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RAE1P78406 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RAE1P78406 RNU6-217P-201ENST00000384164 104 ntBASIC3.3□□□□□ -1.88
RAE1P78406 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RAE1P78406 AL360182.1-201ENST00000397433 468 ntBASIC3.3□□□□□ -1.88
RAE1P78406 MIR548K-201ENST00000408406 116 ntBASIC3.3□□□□□ -1.88
RAE1P78406 RNU2-3P-201ENST00000410144 191 ntBASIC3.3□□□□□ -1.88
RAE1P78406 RNU2-68P-201ENST00000410878 191 ntBASIC3.3□□□□□ -1.88
RAE1P78406 RAB9AP3-201ENST00000412737 573 ntBASIC3.3□□□□□ -1.88
RAE1P78406 CYCSP33-201ENST00000414485 327 ntBASIC3.3□□□□□ -1.88
RAE1P78406 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.3□□□□□ -1.88
RAE1P78406 CYCSP4-201ENST00000429682 331 ntBASIC3.3□□□□□ -1.88
RAE1P78406 AC092573.2-201ENST00000434546 243 ntBASIC3.3□□□□□ -1.88
RAE1P78406 SNRPEP9-201ENST00000436794 238 ntBASIC3.3□□□□□ -1.88
RAE1P78406 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.3□□□□□ -1.88
RAE1P78406 MTND1P17-201ENST00000448961 204 ntBASIC3.3□□□□□ -1.88
RAE1P78406 RAB9AP1-201ENST00000449393 573 ntBASIC3.3□□□□□ -1.88
RAE1P78406 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
RAE1P78406 AC021205.2-201ENST00000480069 347 ntBASIC3.3□□□□□ -1.88
RAE1P78406 AC011005.2-201ENST00000487324 359 ntBASIC3.3□□□□□ -1.88
RAE1P78406 RPL21P13-201ENST00000488305 481 ntBASIC3.3□□□□□ -1.88
RAE1P78406 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.3□□□□□ -1.88
RAE1P78406 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.3□□□□□ -1.88
RAE1P78406 AC110768.1-201ENST00000509222 400 ntBASIC3.3□□□□□ -1.88
RAE1P78406 AC104619.4-201ENST00000510773 249 ntBASIC3.3□□□□□ -1.88
RAE1P78406 MIR892C-201ENST00000516410 77 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms